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Protein Overview: SIP5_SCHPO

General Information:
Name(s) found: SIP5_SCHPO [Swiss-Prot]
Description(s) found:
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  • gi|19112863|ref|NP_596071.1| hypothetical protein SPBC25B2.03 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • Protein sip5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sip5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 554 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNTIGKERQ ENDEELIQHL VQLVDGGFLD PQGVYSSAPA YKTNIVRKLM LERRLMPFYK  60
   61 GLDSYSKDWP ADKVVEVVEK ALGPHKSALL HCAIRQSRSL SVGNTRSLKR DSRGSSDHLL 120
  121 TRNRSNSTPG SISADYRTTA ITTIYANAME CPICFLYYPS NFNYTRCCAQ PICSECFVEI 180
  181 RRAEPHLPTV HANEPTPNEF DLISEPAKCP YCMTERFGVI YKPNPKLTPF SFNNNPDTLP 240
  241 SNIAPMGTLS KSSLPLHHIP WPPNQHIKFA HDDKNVVSTD FIHPDWQYKL ERARRRALRR 300
  301 AANATLLNSH LLETGPANAN ANHNTDLSHD PTSHGGPRRT LSSRRQHYLA NVEQLMLAEA 360
  361 IRQSLLDAQS NDSTNSLPST EVSQPDSTNI SNEQEIVQPQ PTHTTNVALV EEINRPDSVE 420
  421 SAITASSSID TGNENETQEV NSDSLPQFVH QTMTQTNFQE SSPSVAADET RVHNVDEYIE 480
  481 QQDLDELIHS PIASTNPFLA DQFARSETVD LNAHICSPAL SVSDDGVTAT NKTQSSFPSV 540
  541 YEHQLKSNEL ERGH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..279] FFAS03 0.991 Hrs
    2 View Details [280..376] MSA 1.021987 View MSA. Confident ab initio structure predictions are available.
    3 View Details [377..554] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.18807294523099 bayes_pls_golite062009
  • protein binding
    		•  1.3899161465056 bayes_pls_golite062009
  • hydrolase activity
    		•  0.612485742121248 bayes_pls_golite062009
  • clathrin binding
    		•  0.536431227881258 bayes_pls_golite062009
  • DNA binding
    		•  0.323179972743082 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle