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Protein Overview: gi|124115842, gi...

General Information:
Name(s) found: gi|153213643 [NCBI NR]
gi|124115842 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|153213643|ref|ZP_01948916.1| basal-body rod modification protein FlgD [Vibrio cholerae 1587] [NCBI NR]
  • gi|124115842|gb|EAY34662.1| basal-body rod modification protein FlgD [Vibrio cholerae 1587] [NCBI NR]
    • Organism: Vibrio cholerae 1587
    Length: 235 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVNNVGQS GLSYIDQLKA LQEQKKPDET TGQKSLKQED FLSLLTKQLA QQDPFKPVSN  60
   61 DQMIAQMASF ATVDGIGKMN TQFESLNSSM TSNQALQASS LVGRDVLVPG AAGMKKPDGG 120
  121 MAAMVKLPQS IDNLFIRIEN EAGQLVRTFD VGAKSSGDNR VEWDGKDQNG NPLPGGKYKV 180
  181 KASGLLDGES KEFEVSTYAN VNSVLLGKGD GNVLLNLAGF DAPVRLAEVL EVGKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] Pfam 32.823909 No description for PF03963.5 was found. No confident structure predictions are available.
    2 View Details [131..235] PSI-BLAST 8.69897 Structure of C5a peptidase- a key virulence factor from Streptococcus


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle