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Protein Overview: gi|125559288

General Information:
Name(s) found: gi|125559288 [NCBI NR]
Description(s) found:
  • gi|125559288|gb|EAZ04824.1| hypothetical protein OsI_27003 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 411 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCSWALAAL VLGFLVVAVH GSEPWLNQTQ VYSTNANSGS NGVFVGITLI QSAAAKGAVC  60
   61 LDGSLPGYHL HRGFGSGANS WLVNLEGGGW CNDVKSCVFR KSSRRGSSNH MESQLQFTGI 120
  121 MSNRPEENPD FYNWNRVKVR YCDGGSFTGD GADASAGLYF RGQRIWQAAM DDLMAQGMRY 180
  181 ANQALLSGCS AGGVSTILHC DEFRGLFSGS TNVKCLADAG MFLDFVDVSG QREMRDFFNG 240
  241 IVRLQGSGRS LPRSCTSRMD KTSCFFPQNV VPNIQTPTFI LNTAYDVWQL QQSVAPKRAD 300
  301 PQGLWRGCRM NHASCNSNQL QFLQGFRNQM LDAVRGFSGA RQNGLFINSC FAHCQSERQD 360
  361 TWYAGDSPRL GNKRIAEAVG DWFFDRADAK YTDCAYPCDG TCHHLTFRGD Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..338] FFAS03 1.27 Cephalosporin C deacetylase
    2 View Details [339..411] MSA 2.047976 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.768312194494454 bayes_pls_golite062009
  • hydrolase activity
    		•  0.305773042344667 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle