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Protein Overview: gi|125554438

General Information:
Name(s) found: gi|125554438 [NCBI NR]
Description(s) found:
  • gi|125554438|gb|EAZ00044.1| hypothetical protein OsI_22046 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 531 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLNKVVSN GDTRSMLPNK VTALNPNAAE FVPSCIRPSF ESSAVSDVSK ADLRASGKTI  60
   61 LDRSESSKSN NSDDEAHQFW RKQLPDDIIP DFSFEKIEQE PEELSLAGLS LNAPPFYGTT 120
  121 ASRFSREHDL SSQANKSLEL GLTSLLYEDN SQASFPTMGS SNWEQNFVGD LHFTNGNQGL 180
  181 HYDSESAAGF SDSFASDYAA ATDDVLDPLA YLASQFPDFS SESLAELYYA NGCDFNHTIE 240
  241 ILTQLEMQVD ATSNPTLTPR TPNFSTGDFP ALPTVEDQNG FSKGNADILS IFNGRSSPSV 300
  301 STGTGDFVSA VRKLASQNSG HWKYKKGPEY GNGVSTVSVP KQYSSTTKTS SGNKFQSVSS 360
  361 ARAAPWLETG DAVANMYSES RGEARDFARI RNACFEQARQ AYLIGNKALA KELSMKGQTY 420
  421 NTQMKASHEK AREAIYRQRN PSSQRGSDRL IDLHGLHVNE AIHILKVELG TLKSTARATG 480
  481 ERMQVMICVG TGHHTKGSRT ARLPIAVEQF LLEEGLHYTQ AQPGLLRVVV F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..174] deduced N/A No confident structure predictions are available.
    2 View Details [175..262] MSA 3.046989 View MSA. No confident structure predictions are available.
    3 View Details [263..362] deduced N/A No confident structure predictions are available.
    4 View Details [363..440] Pfam 13.79588 No description for PF08590.1 was found. Confident ab initio structure predictions are available.
    5 View Details [441..531] PSI-BLAST 23.0 No description for 2d9iA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle