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Protein Overview: S10A4_RAT

General Information:
Name(s) found: S10A4_RAT [Swiss-Prot]
Description(s) found:
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  • pir||S01759 calvasculin - rat [NCBI NR]
  • gi|6981326|ref|NP_036750.1| S100 calcium-binding protein A4 [Rattus norvegicus] [NCBI NR]
  • gi|56833|emb|CAA30014.1| put. p9Ka [Rattus norvegicus] [NCBI NR]
  • gi|206830|gb|AAA42098.1| S-100-related protein [NCBI NR]
  • gi|149047966|gb|EDM00542.1| S100 calcium-binding protein A4 [Rattus norvegicus] [NCBI NR]
  • gi|115603|sp|P05942.1|S10A4_RAT RecName: Full=Protein S100-A4; AltName: Full=S100 calcium-binding protein A4; AltName: Full=Metastasin; AltName: Full=Placental calcium-binding protein; AltName: Full=Nerve growth factor-induced protein 42A; AltName: Full=P [NCBI NR]
  • Protein S100-A4 OS=Rattus norvegicus GN=S100a4 PE=2 SV=1 [Swiss-Prot]
  • (P05942) S100 calcium-binding protein A4 (Metastasin) (Placental calcium-binding protein) (Nerve growth factor induced protein 42A) (P9K) [Swiss-Prot]
  • Ensembl_locations(Chr-bp):2-178880248 Placental calcium-binding protein [hmr_yeast5_DM3-1_pombe.fasta]
  • S100 calcium-binding protein A4; Protein 9 Ka homologous to calcium-binding protein; calvasculin; metastasin [HMR_022704-rand.fasta]
  • S100 calcium-binding protein A4; calvasculin; metastasin; Protein 9 Ka homologous to calcium-binding protein [071204_hmrz_cont.fasta]
  • S100 calcium-binding protein A4 [Rattus norvegicus]gi|56833|emb|CAA30014.1| put. p9Ka [Rattus norvegicus]gi|92272|pir||S01759 calvasculin - ratgi|115603|sp|P05942|S104_RAT S100 calcium-binding protein A4 (Metastasin) (Placental calcium-binding protein) [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Protein S100-A4 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 S100 calcium-binding protein A4 [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta]
  • (NM_012618) protein 9 Ka homologous to calcium-binding protein [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • Protein S100-A4 (S100 calcium-binding protein A4) (Metastasin) (Placental calcium-binding protein) (Nerve growth factor-induced protein 42A) (P9K) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • S100 calcium-binding protein A4 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • put. p9Ka [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • S-100-related protein [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 S100 CALCIUM-BINDING PROTEIN A4 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=S100a4 Protein S100-A4 [rat-ipi-250309-contam.fasta]
  • Protein S100-A4 OS=Rattus norvegicus GN=S100a4 [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 101 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN][IEA]
    perinuclear region of cytoplasm [UNKNOWN]
    cytoplasm [UNKNOWN][IEA]
    [NOT]nucleolus [UNKNOWN]
    neuron projection [IDA]
    Biological Process: positive regulation of I-kappaB kinase/NF-kappaB cascade [UNKNOWN]
    Molecular Function: protein binding [UNKNOWN][IPI]
    protein homodimerization activity [TAS]
    protein heterodimerization activity [TAS]
    calcium ion binding [UNKNOWN][TAS]
    calcium-dependent protein binding [IMP]
    RAGE receptor binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPLEEALD VIVSTFHKYS GNEGDKFKLN KTELKELLTR ELPSFLGRRT DEAAFQKLMN  60
   61 NLDSNRDNEV DFQEYCVFLS CIAMMCNEFF EGCPDKEPRK K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] PSI-BLAST 23.0 Calcyclin (S100)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle