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Protein Overview: PA1B2_RAT

General Information:
Name(s) found: PA1B2_RAT [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • Platelet-activating factor acetylhydrolase IB subunit beta OS=Rattus norvegicus GN=Pafah1b2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 229 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [UNKNOWN][IEA]
    Biological Process: spermatogenesis [UNKNOWN][IEA]
    lipid catabolic process [IEA]
    Molecular Function: hydrolase activity, acting on ester bonds [IEA]
    protein binding [IPI]
    platelet-activating factor acetyltransferase activity [TAS]
    1-alkyl-2-acetylglycerophosphocholine esterase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQGDSNPAA IPHAAEDIQG DDRWMSQHNR FVLDCKDKEP DVLFVGDSMV QLMQQYEIWR  60
   61 ELFSPLHALN FGIGGDTTRH VLWRLKNGEL ENIKPKVIVV WVGTNNHENT AEEVAGGIEA 120
  121 IVQLINTRQP QAKIIVLGLL PRGEKPNPLR QKNAKVNQLL KVSLPKLANV QLLDIDGGFV 180
  181 HSDGAISCHD MFDFLHLTGG GYAKICKPLH ELIMQLLEET PEEKQTTIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..229] PSI-BLAST 62.0 Platelet-activating factor acetylhydrolase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.84091517928452 bayes_pls_golite062009
  • platelet-activating factor acetyltransferase activity
    		•  0.732293103277365 bayes_pls_golite062009
  • protein binding
    		•  0.564720396960066 bayes_pls_golite062009
  • hydrolase activity
    		•  0.45071330223777 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle