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Protein Overview: TCTP_RAT

General Information:
Name(s) found: TCTP_RAT [Swiss-Prot]
Description(s) found:
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  • gi|687712|gb|AAA62507.1| lens epithelial protein [NCBI NR]
  • gi|55562869|gb|AAH86358.1| Tumor protein, translationally-controlled 1 [Rattus norvegicus] [NCBI NR]
  • gi|51703318|sp|P63029.1|TCTP_RAT RecName: Full=Translationally-controlled tumor protein; Short=TCTP; AltName: Full=Lens epithelial protein [NCBI NR]
  • gi|16758734|ref|NP_446319.1| tumor protein, translationally-controlled 1 [Rattus norvegicus] [NCBI NR]
  • gi|149049977|gb|EDM02301.1| rCG37103, isoform CRA_c [Rattus norvegicus] [NCBI NR]
  • Translationally-controlled tumor protein OS=Rattus norvegicus GN=Tpt1 PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):5-195941744;1-21324679 Translationally controlled tumor protein [hmr_yeast5_DM3-1_pombe.fasta]
  • tumor protein, translationally-controlled 1 [HMR_022704-rand.fasta]
  • Tumor protein, translationally-controlled 1 [Rattus norvegicus]gi|6678437|ref|NP_033455.1| tumor protein, translationally-controlled 1 [Mus musculus]gi|16758734|ref|NP_446319.1| tumor protein, translationally-controlled 1 [Rattus norvegicus]gi|30385204 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Translationally-controlled tumor protein [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • (NM_053867) tumor protein, translationally-controlled 1 [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • Tax_Id=10116 Translationally controlled tumor protein [EBI-IPI_rat_3.08_07-12-2005_origrev_con.fasta]
  • Translationally-controlled tumor protein (TCTP) (Lens epithelial protein) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • tumor protein, translationally-controlled 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • rCG37103, isoform CRA_c [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tumor protein, translationally-controlled 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • lens epithelial protein [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 TRANSLATIONALLY CONTROLLED TUMOR PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=Tpt1 Translationally-controlled tumor protein [rat-ipi-250309-contam.fasta]
  • Translationally-controlled tumor protein OS=Rattus norvegicus GN=Tpt1 [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 172 amino acids

    Gene Ontology:
    Cellular Component: extracellular space [UNKNOWN]
    tubulin complex [UNKNOWN]
    cytoplasm [UNKNOWN][IEA]
    multivesicular body [UNKNOWN]
    Biological Process: cell proliferation [TAS]
    anti-apoptosis [UNKNOWN]
    spermatogenesis [IEP]
    response to virus [UNKNOWN]
    Molecular Function: protein binding [UNKNOWN]
    calcium ion binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIYRDLISH DELFSDIYKI REIADGLCLE VEGKMVSRTE GAIDDSLIGG NASAEGPEGE  60
   61 GTESTVVTGV DIVMNHHLQE TSFTKEAYKK YIKDYMKSLK GKLEEQKPER VKPFMTGAAE 120
  121 QIKHILANFN NYQFFIGENM NPDGMVALLD YREDGVTPFM IFFKDGLEME KC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] PSI-BLAST 82.522879 No description for 2hr9A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on sulfur group of donors
    		•  3.4377744251418 bayes_pls_golite062009
  • protein-methionine-R-oxide reductase activity
    		•  3.14392283789517 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor
    		•  2.6167603393936 bayes_pls_golite062009
  • binding
    		•  2.26574571365153 bayes_pls_golite062009
  • transition metal ion binding
    		•  1.89566171684057 bayes_pls_golite062009
  • cation binding
    		•  1.8695053562775 bayes_pls_golite062009
  • metal ion binding
    		•  1.8695053562775 bayes_pls_golite062009
  • ion binding
    		•  1.86234474080078 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.14994807703391 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.009242671721 bayes_pls_golite062009
  • DNA binding
    		•  0.841663070276259 bayes_pls_golite062009
  • catalytic activity
    		•  0.566791077255496 bayes_pls_golite062009
  • protein binding
    		•  0.327945052023132 bayes_pls_golite062009
  • transcription factor activity
    		•  0.202907039530709 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle