General Information: |
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Name(s) found: |
SCAF8_RAT
[Swiss-Prot]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Rattus norvegicus |
Length: | 1268 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IMP]
spliceosomal complex [IEA] nuclear matrix [IDA] |
Biological Process: |
RNA splicing
[IEA]
transcription from RNA polymerase II promoter [IMP] mRNA processing [IMP] |
Molecular Function: |
nucleotide binding
[IEA]
nucleic acid binding [IEA] RNA polymerase binding [IPI] protein domain specific binding [IMP] RNA binding [IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MEAVKTFNSE LYSLNDYKPP ISKAKMTQIT KAAIKAIKFY KHVVQSVEKF IQKCKPEYKV 60 61 PGLYVIDSIV RQSRHQVGQE KDVCAPRFSN NIISTFQNLY RCPGDDKSKI VRVLNLWQKN 120 121 NVFKSEIIQP LLDMAAGIPP PVVTPVLAST TVAMSNTPGT PVTPVTPANV VQGLPDPWVS 180 181 QITNTDTLAA VAQILQSPQG QQLQQLIQTL QIQQQKPQPS ILQALDAGLV VQLQALTAQL 240 241 TAAAAAANTL TPLDQGVSFN KKLMDRFDFG EDSEHSEESK KEIPTPQLSH VSESVNNSIF 300 301 HQIAEQLQQQ NLEQLRQQLL EQQQPQKVTP QDSQEGAFGS EHSASPSQGS SQQHFLEPEA 360 361 NLDDSIDIQQ QDMDIDEGQD VVEEEIFEPE AKKVAVRSRS RTHSRSRSRS PRKRRSRSRS 420 421 GSRKRKHRKR SRSRSRERKR KSSRSYSSER RAREREKERQ KKGLPPVRSK TLSVCSTTLW 480 481 VGQVDKKATQ QDLTNLFEEF GQIESINMIP PRGCAYVCMV HRQDSFRALQ KLSSGSYKIG 540 541 SKVIKIAWAL NKGVKTEYKQ FWDVDLGVTY IPWEKVKVDD LDGFAEGGMI DQETVNAEWE 600 601 TVKTSEPVKE TVQTTQSPAA VEKETVVTTQ SEVFPPPVTM LQIPVAPTVP AVSLVPPAFP 660 661 VSMPVPPPGF SPIPPPPFLR ASFNPSQPPP GFMPPPVPPP VVPPPAIPPV VPTSLVQPPL 720 721 SMTPETVKDV GFGSLVLPGG SVAGNLAPST LPAGNVFNPP SKAEPEEKVP HLTEHQIPSG 780 781 ENTRPVIPSD IPSSAPMLAQ PPGASNTSGI LCVQRPNVSS NSEILGVRPA NVSNSAAIMG 840 841 AQPPNMLNNS GILGIQPPNV SSGSGLLGVL PPNLPNNSGL VGLQPPNVTN PAGLLGTQPP 900 901 IGPQNLPPLT IPAQRMPALP MLDIRPGLIA QAPGPRFPLL QPGIPPQRGI PPPSVLDAAL 960 961 HPPPRGPFPP GDLFSQPERP FLAPGRPNID SVPNPDKRIP LGNDNIQQEG DRDYRFPPIE1020 1021 TREGINRPPP VDVRDVVGRP IDPREGPGRP PLDGRDHFGR PPVDMRETLV RPGLDHLGRR1080 1081 DHFGFPPEKP WGPRDFDERE HRVLPVFGGP KGLHEERGRF RAGNYRFDPR SGPWNRGFGQ1140 1141 EVHRDFDDRR RPWERQRDRD DRDFDFCREI NGNRLGRDRI QNTWVPPPHA RVFDYFEGAT1200 1201 SQRKGENVPQ VNGGNTERHA PPPPLPVQKD PELYEKLASS GDADKEESGT AAGVESEAVV1260 1261 ESTETEGT |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)