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Protein Overview: FBpp0312173, Sr-...

General Information:
Name(s) found: FBpp0312173 [FlyBase]
Sr-CI-PA / FBpp0077156 [FlyBase]
Description(s) found:
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  • gi|7295738|gb|AAF51042.1| scavenger receptor class C, type I [Drosophila melanogaster] [NCBI NR]
  • gi|7158855|gb|AAF37565.1|AF221506_3 scavenger receptor protein CI precursor [Drosophila melanogaster] [NCBI NR]
  • gi|58613758|gb|AAW79470.1| SR-CI [Drosophila melanogaster] [NCBI NR]
  • gi|17137108|ref|NP_477102.1| scavenger receptor class C, type I [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0312173; name=Sr-CI-PB; parent=FBgn0014033,FBtr0346582; dbxref=FlyBase:FBpp0312173,FlyBase_Annotation_IDs:CG4099-PB; MD5=7e9f53db0e2f0f6e81f8589a976f139d; length=629; release=r5.56; species=Dmel; [FlyBase]
  • The gene Scavenger receptor class C, type I is referred to in FlyBase by the symbol Dmel\Sr-CI (CG4099, FBgn0014033). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:4121721..4124002. It has the cytological map location 24D6. It is reported to have molecular function</span>: scavenger receptor activity; polysaccharide binding. It is reported to be involved in the biological process</span>: defense response to Gram-negative bacterium; response to bacterium; defense response; immune response; phagocytosis. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG4099-PA translation from_gene[CG4099 Sr-CI FBgn0014033] seq_release:3 mol_weight=69917 cds_boundaries:(2L:4,114,329..4,116,465[+]) aa_length:629 transcript_info:[CG4099-RA seq_release:3] gene_info:[gene symbol:Sr-CI FBgn0014033 gene_boundaries:(2L:4 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V3H7) SR-CI protein [DrosMelano7227.FASTAC.txt]
  • (AE003577) Sr-CI gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG4099-PA [Drosophila melanogaster]gi|7158855|gb|AAF37565.1| scavenger receptor protein CI precursor [Drosophila melanogaster]gi|17137108|ref|NP_477102.1| CG4099-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0077156; name=Sr-CI-PA; parent=FBgn0014033,FBtr0077467; dbxref=FlyBase:FBpp0077156,FlyBase_Annotation_IDs:CG4099-PA,GB_protein:AAF51042.1,REFSEQ:NP_4771 [fly-100309-contam.fasta]
  • CG4099-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Scavenger receptor class C, type I CG4099-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • SR-CI [Drosophila melanogaster] [nr-271106-contam.fasta]
  • scavenger receptor protein CI precursor [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0077156; name=Sr-CI-PA; parent=FBgn0014033,FBtr0077467; dbxref=FlyBase:FBpp0077156,FlyBase_Annotation_IDs:CG4099-PA,GB_protein:AAF51042.1,REFSEQ:NP_477102,GB_protein:AAF51042; MD5=7e9f53db0e2f0f6e81f8589a976f139d; length=629; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0077156; name=Sr-CI-PA; parent=FBgn0014033,FBtr0077467; dbxref=FlyBase:FBpp0077156,FlyBase_Annotation_IDs:CG4099-PA,GB_protein:AAF51042.1,REFSEQ:NP_477102,GB_protein:AAF51042; MD5=7e9f53db0e2f0f6e81f8589a976f139d; length=629; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • SR-CI OS=Drosophila melanogaster GN=Sr-CI PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0077156; name=Sr-CI-PA; parent=FBgn0014033,FBtr0077467; dbxref=FlyBase:FBpp0077156,FlyBase_Annotation_IDs:CG4099-PA,GB_protein:AAF51042.1,REFSEQ:NP_477102,GB_protein:AAF51042,FlyMine:FBpp0077156,modMine:FBpp0077156; MD5=7e9f53db0e2f0f6e81f8589a976f139d; length=629; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • SR-CI OS=Drosophila melanogaster GN=Sr-CI PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0077156; name=Sr-CI-PA; parent=FBgn0014033,FBtr0077467; dbxref=FlyBase:FBpp0077156,FlyBase_Annotation_IDs:CG4099-PA,GB_protein:AAF51042.1,REFSEQ:NP_477102,GB_protein:AAF51042,FlyMine:FBpp0077156,modMine:FBpp0077156; MD5=7e9f53db0e2f0f6e81f8589a976f139d; length=629; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0312173; name=Sr-CI-PB; parent=FBgn0014033,FBtr0346582; dbxref=FlyBase:FBpp0312173,FlyBase_Annotation_IDs:CG4099-PB,GB_protein:AHN54114,REFSEQ:NP_001285599; MD5=7e9f53db0e2f0f6e81f8589a976f139d; length=629; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0077156; name=Sr-CI-PA; parent=FBgn0014033,FBtr0077467; dbxref=FlyBase:FBpp0077156,FlyBase_Annotation_IDs:CG4099-PA,GB_protein:AAF51042.1,REFSEQ:NP_477102,GB_protein:AAF51042,FlyMine:FBpp0077156,modMine:FBpp0077156; MD5=7e9f53db0e2f0f6e81f8589a976f139d; length=629; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0312173; name=Sr-CI-PB; parent=FBgn0014033,FBtr0346582; dbxref=FlyBase:FBpp0312173,FlyBase_Annotation_IDs:CG4099-PB,GB_protein:AHN54114,REFSEQ:NP_001285599; MD5=7e9f53db0e2f0f6e81f8589a976f139d; length=629; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • SR-CI OS=Drosophila melanogaster GN=Sr-CI PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0077156 type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0077156; name=Sr-CI-PA; parent=FBgn0014033,FBtr0077467; dbxref=FlyBase:FBpp0077156,FlyBase_Annotation_IDs:CG4099-PA,GB_protein:AAF51042.1,REFSEQ:NP_477102,GB_protein:AAF51042,FlyMine:FBpp0077156,modMine:FBpp0077156; MD5=7e9f53db0e2f0f6e81f8589a976f139d; length=629; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0312173 type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0312173; name=Sr-CI-PB; parent=FBgn0014033,FBtr0346582; dbxref=FlyBase:FBpp0312173,FlyBase_Annotation_IDs:CG4099-PB,GB_protein:AHN54114,REFSEQ:NP_001285599; MD5=7e9f53db0e2f0f6e81f8589a976f139d; length=629; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0077156; name=Sr-CI-PA; parent=FBgn0014033,FBtr0077467; dbxref=FlyBase:FBpp0077156,FlyBase_Annotation_IDs:CG4099-PA,GB_protein:AAF51042.1,REFSEQ:NP_477102,GB_protein:AAF51042,UniProt/TrEMBL:Q9V3H7,FlyMine:FBpp0077156,modMine:FBpp0077156; MD5=7e9f53db0e2f0f6e81f8589a976f139d; length=629; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:join(4121760..4121979,4122046..4122583,4122709..4123478,4123538..4123899); ID=FBpp0312173; name=Sr-CI-PB; parent=FBgn0014033,FBtr0346582; dbxref=FlyBase:FBpp0312173,FlyBase_Annotation_IDs:CG4099-PB,GB_protein:AHN54114,REFSEQ:NP_001285599,UniProt/TrEMBL:Q9V3H7; MD5=7e9f53db0e2f0f6e81f8589a976f139d; length=629; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 629 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [NAS]
    membrane [IEA]
    Biological Process: response to bacterium [TAS]
    immune response [IEA][TAS]
    defense response to Gram-negative bacterium [TAS]
    phagocytosis [TAS]
    defense response [NAS]
    Molecular Function: scavenger receptor activity [IEA][NAS][TAS]
    polysaccharide binding [IEA][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFFWTLAVI VIYCIGHIHG RCERSIDLDN GSINYRQRNV VRFRCNRGYT LQGTVMQTCD  60
   61 RDGRLRGEKP FCASRGCARP EDPENGHVEN LSLRADVVCH DGYVLVGGRT AYCDGERWST 120
  121 QLGSCRRSNH TRDHSCDFES EDQCGWEAET TFRRPWKRVS TVSDIHSLRT GPRHDHTFKN 180
  181 ESGGHYMRME TQMGAYGSYH LLSPIYPRSL TLKTACCFRF HYFMFGAGVD NLVVSVKPVS 240
  241 MPMATMWNRF RANCSKFEIS GQQGTQWLEH TISIDEMQED FQVIFTATDA RSQFGDIAID 300
  301 DVKLMTGSEC GTNGFSTTTE PTAPTGSNEQ PLVYDMMSCS GRCGTSISAS NITNNGIVMG 360
  361 CGCNDECLSD ETCCLNYLEE CTKELLTTTE DDISSLPPTV TSTSTSTTRK STTTTTTSTT 420
  421 TTSTTTTKRP TTTTTTTKAT TTKRTTTTKK PTTTSTTPKP TTTTSTTPKS TTSTTSTTST 480
  481 TPTTTTTINV FTTKKTTIMI PTSSTEKTTG INTTMKTRKR ITWNVDPQDI EGHMDTSGST 540
  541 PNPALVVLYL LLAIVLVVVL ANVVNRWIIP ITGSKTSSEK AVRFKKAFDS LKKQRKRNSM 600
  601 DDQPLCDSDN DDVEYFEEMG VDIRHRTDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle