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Protein Overview: CG17737-PA

General Information:
Name(s) found: CG17737-PA / FBpp0072908 [FlyBase]
Description(s) found:
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  • gi|7292337|gb|AAF47744.1| CG17737 [Drosophila melanogaster] [NCBI NR]
  • gi|21357193|ref|NP_647792.1| CG17737 [Drosophila melanogaster] [NCBI NR]
  • gi|20152073|gb|AAM11396.1| RE14985p [Drosophila melanogaster] [NCBI NR]
  • gi|11135384|sp|Q9VZS3.1|SUI1_DROME RecName: Full=Protein translation factor SUI1 homolog [NCBI NR]
  • Protein translation factor SUI1 homolog OS=Drosophila melanogaster GN=CG17737 PE=1 SV=1 [Swiss-Prot]
  • This gene is referred to in FlyBase by the symbol Dmel\CG17737 (CG17737, FBgn0035423). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:3223350..3224704. It has the cytological map location 63C1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: translation initiation factor activity. It is reported to be involved in the biological process</span>: translation. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG17737-PA translation from_gene[CG17737 CG17737 FBgn0035423] seq_release:3 mol_weight=12450 cds_boundaries:(3L:3,204,128..3,205,086[+]) aa_length:110 transcript_info:[CG17737-RA seq_release:3] gene_info:[gene symbol:CG17737 FBgn0035423 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VZS3) Protein translation factor SUI1 homolog [DrosMelano7227.FASTAC.txt]
  • (AE003477) CG17737 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • similar to Drosophila melanogaster CG17737 [Drosophila yakuba]gi|7292337|gb|AAF47744.1| CG17737-PA [Drosophila melanogaster]gi|20152073|gb|AAM11396.1| RE14985p [Drosophila melanogaster]gi|21357193|ref|NP_647792.1| CG17737-PA [Drosophila melanogaster]g [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:join(3223499..3223526,3223770..3223927,3224314..3224460); ID=FBpp0072908; name=CG17737-PA; parent=FBgn0035423,FBtr0073044; dbxref=FlyBase:FBpp0072908,FlyBase_Annotation_IDs:CG17737-PA,GB_protein:AAF47744.1,REFSEQ:NP_647792,GB_protein: [fly-100309-contam.fasta]
  • RE14985p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG17737-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Protein translation factor SUI1 homolog [nr-271106-contam.fasta]
  • type=protein; loc=3L:join(3223499..3223526,3223770..3223927,3224314..3224460); ID=FBpp0072908; name=CG17737-PA; parent=FBgn0035423,FBtr0073044; dbxref=FlyBase:FBpp0072908,FlyBase_Annotation_IDs:CG17737-PA,GB_protein:AAF47744.1,REFSEQ:NP_647792,GB_protein:AAF47744; MD5=7b25efa0661200833d610e309f6811a4; length=110; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:join(3223499..3223526,3223770..3223927,3224314..3224460); ID=FBpp0072908; name=CG17737-PA; parent=FBgn0035423,FBtr0073044; dbxref=FlyBase:FBpp0072908,FlyBase_Annotation_IDs:CG17737-PA,GB_protein:AAF47744.1,REFSEQ:NP_647792,GB_protein:AAF47744; MD5=7b25efa0661200833d610e309f6811a4; length=110; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3L:join(3223499..3223526,3223770..3223927,3224314..3224460); ID=FBpp0072908; name=CG17737-PA; parent=FBgn0035423,FBtr0073044; dbxref=FlyBase:FBpp0072908,FlyBase_Annotation_IDs:CG17737-PA,GB_protein:AAF47744.1,REFSEQ:NP_647792,GB_protein:AAF47744,FlyMine:FBpp0072908,modMine:FBpp0072908; MD5=7b25efa0661200833d610e309f6811a4; length=110; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:join(3223499..3223526,3223770..3223927,3224314..3224460); ID=FBpp0072908; name=CG17737-PA; parent=FBgn0035423,FBtr0073044; dbxref=FlyBase:FBpp0072908,FlyBase_Annotation_IDs:CG17737-PA,GB_protein:AAF47744.1,REFSEQ:NP_647792,GB_protein:AAF47744,FlyMine:FBpp0072908,modMine:FBpp0072908; MD5=7b25efa0661200833d610e309f6811a4; length=110; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(3223499..3223526,3223770..3223927,3224314..3224460); ID=FBpp0072908; name=CG17737-PA; parent=FBgn0035423,FBtr0073044; dbxref=FlyBase:FBpp0072908,FlyBase_Annotation_IDs:CG17737-PA,GB_protein:AAF47744.1,REFSEQ:NP_647792,GB_protein:AAF47744,FlyMine:FBpp0072908,modMine:FBpp0072908; MD5=7b25efa0661200833d610e309f6811a4; length=110; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0072908 type=protein; loc=3L:join(3223499..3223526,3223770..3223927,3224314..3224460); ID=FBpp0072908; name=CG17737-PA; parent=FBgn0035423,FBtr0073044; dbxref=FlyBase:FBpp0072908,FlyBase_Annotation_IDs:CG17737-PA,GB_protein:AAF47744.1,REFSEQ:NP_647792,GB_protein:AAF47744,FlyMine:FBpp0072908,modMine:FBpp0072908; MD5=7b25efa0661200833d610e309f6811a4; length=110; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:join(3223499..3223526,3223770..3223927,3224314..3224460); ID=FBpp0072908; name=eIF1-PA; parent=FBgn0035423,FBtr0073044; dbxref=FlyBase:FBpp0072908,FlyBase_Annotation_IDs:CG17737-PA,GB_protein:AAF47744.1,REFSEQ:NP_647792,GB_protein:AAF47744,UniProt/Swiss-Prot:Q9VZS3,FlyMine:FBpp0072908,modMine:FBpp0072908; MD5=7b25efa0661200833d610e309f6811a4; length=110; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 110 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: translational initiation [IEA]
    translation [NAS]
    Molecular Function: translation initiation factor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIQNLNTRD PFADAIKGND DDIQDGLVHI RIQQRNGRKT LTTVQGLSAE YDLKKIVRSC  60
   61 KKEFACNGTV IEHPEYGEVL QLQGDQRENI CQWLTKVGLA KPDQLKVHGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] PSI-BLAST 41.0 HUMAN TRANSLATION INITIATION FACTOR EIF1, NMR, 29 STRUCTURES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation initiation factor activity
    		•  6.56930940751046 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.96971687610169 bayes_pls_golite062009
  • binding
    		•  2.42849959483419 bayes_pls_golite062009
  • translation regulator activity
    		•  2.27579767245564 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  2.25914933413253 bayes_pls_golite062009
  • protein binding
    		•  0.420735403363425 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle