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Protein Overview: HP4-PB

General Information:
Name(s) found: HP4-PB / FBpp0076480 [FlyBase]
Description(s) found:
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  • gi|24660544|ref|NP_729314.1| HP1-interacting protein, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|23093968|gb|AAF50500.2| HP1-interacting protein, isoform B [Drosophila melanogaster] [NCBI NR]
  • The gene Heterochromatin protein 4 is referred to in FlyBase by the symbol Dmel\HP4 (CG8044, FBgn0035829). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:7968538..7969257. It has the cytological map location 66A21. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: chromatin organization. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG8044-PB translation from_gene[CG8044 CG8044 FBgn0035829] seq_release:3 mol_weight=11614 cds_boundaries:(3L:7,935,276..7,935,575[-]) aa_length:100 transcript_info:[CG8044-RB seq_release:3] gene_info:[gene symbol:CG8044 FBgn0035829 gene_boundaries:(3L [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VSC4) CG8044 protein [DrosMelano7227.FASTAC.txt]
  • CG8044-PB, isoform B [Drosophila melanogaster]gi|24660544|ref|NP_729314.1| CG8044-PB [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(7968842..7969144); ID=FBpp0076480; name=HP4-PB; parent=FBgn0035829,FBtr0076765; dbxref=FlyBase:FBpp0076480,FlyBase_Annotation_IDs:CG8044-PB,GB_protein:AAF50500.2,REFSEQ:NP_729314,GB_protein:AAF50500; MD5=056a2b2f6e4e83128fc [fly-100309-contam.fasta]
  • CG8044-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(7968842..7969144); ID=FBpp0076480; name=HP4-PB; parent=FBgn0035829,FBtr0076765; dbxref=FlyBase:FBpp0076480,FlyBase_Annotation_IDs:CG8044-PB,GB_protein:AAF50500.2,REFSEQ:NP_729314,GB_protein:AAF50500; MD5=056a2b2f6e4e83128fc967225eb55083; length=100; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(7968842..7969144); ID=FBpp0076480; name=HP4-PB; parent=FBgn0035829,FBtr0076765; dbxref=FlyBase:FBpp0076480,FlyBase_Annotation_IDs:CG8044-PB,GB_protein:AAF50500.2,REFSEQ:NP_729314,GB_protein:AAF50500; MD5=056a2b2f6e4e83128fc967225eb55083; length=100; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Heterochromatin protein 4, isoform B OS=Drosophila melanogaster GN=HP4 PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:complement(7968842..7969144); ID=FBpp0076480; name=HP4-PB; parent=FBgn0035829,FBtr0076765; dbxref=FlyBase:FBpp0076480,FlyBase_Annotation_IDs:CG8044-PB,GB_protein:AAF50500.2,REFSEQ:NP_729314,GB_protein:AAF50500,FlyMine:FBpp0076480,modMine:FBpp0076480; MD5=056a2b2f6e4e83128fc967225eb55083; length=100; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • FI16703p1 OS=Drosophila melanogaster GN=HP4 PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3L:complement(7975742..7976044); ID=FBpp0076480; name=HP4-PB; parent=FBgn0035829,FBtr0076765; dbxref=FlyBase:FBpp0076480,FlyBase_Annotation_IDs:CG8044-PB,GB_protein:AAF50500.2,REFSEQ:NP_729314,GB_protein:AAF50500,FlyMine:FBpp0076480,modMine:FBpp0076480; MD5=056a2b2f6e4e83128fc967225eb55083; length=100; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(7975742..7976044); ID=FBpp0076480; name=HP4-PB; parent=FBgn0035829,FBtr0076765; dbxref=FlyBase:FBpp0076480,FlyBase_Annotation_IDs:CG8044-PB,GB_protein:AAF50500.2,REFSEQ:NP_729314,GB_protein:AAF50500,FlyMine:FBpp0076480,modMine:FBpp0076480; MD5=056a2b2f6e4e83128fc967225eb55083; length=100; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q8IQ92, FI16703p1 OS=Drosophila melanogaster GN=HP4 PE=2 SV=2 [DROME.fasta.20160308]
  • FBpp0076480 type=protein; loc=3L:complement(7975742..7976044); ID=FBpp0076480; name=HP4-PB; parent=FBgn0035829,FBtr0076765; dbxref=FlyBase:FBpp0076480,FlyBase_Annotation_IDs:CG8044-PB,GB_protein:AAF50500.2,REFSEQ:NP_729314,GB_protein:AAF50500,FlyMine:FBpp0076480,modMine:FBpp0076480; MD5=056a2b2f6e4e83128fc967225eb55083; length=100; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(7975742..7976044); ID=FBpp0076480; name=HP4-PB; parent=FBgn0035829,FBtr0076765; dbxref=FlyBase:FBpp0076480,FlyBase_Annotation_IDs:CG8044-PB,GB_protein:AAF50500.2,REFSEQ:NP_729314,GB_protein:AAF50500,UniProt/TrEMBL:Q9VSC4,FlyMine:FBpp0076480,modMine:FBpp0076480; MD5=056a2b2f6e4e83128fc967225eb55083; length=100; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 100 amino acids

    Gene Ontology:
    Cellular Component: polytene chromosome chromocenter [IDA]
    polytene chromosome, telomeric region [IDA]
    polytene chromosome band [IDA]
    chromocenter [IDA]
    nucleolus [IDA]
    Biological Process: chromatin organization [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPKTKKMIV KIPRHPYFNV QGERSVEREV EYQVRKCRVN LERIKSSTSP NSRPFPLKPK  60
   61 PKRCIVRVAR LPDVERSEIS VTPASSIMNS DIDESRCQVF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle