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Protein Overview: BobA-PA

General Information:
Name(s) found: BobA-PA / FBpp0075426 [FlyBase]
Description(s) found:
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  • gi|7294346|gb|AAF49695.1| brother of bearded A [Drosophila melanogaster] [NCBI NR]
  • gi|68051473|gb|AAY85000.1| IP06720p [Drosophila melanogaster] [NCBI NR]
  • gi|24664351|ref|NP_525087.2| brother of bearded A [Drosophila melanogaster] [NCBI NR]
  • The gene Brother of Bearded A is referred to in FlyBase by the symbol Dmel\BobA (CG12487, FBgn0040487). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:14938599..14939212. It has the cytological map location 71A2. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: sensory organ precursor cell fate determination; sensory organ development; Notch signaling pathway; cell fate specification. 2 alleles are reported. The phenotypes of these alleles are annotated with: trichogen cell; wing margin bristle; macrochaeta; tormogen cell; microchaeta. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG12487-PA translation from_gene[CG12487 CG12487 FBgn0040808] seq_release:3 mol_weight=8871 cds_boundaries:(3L:14,894,714..14,894,947[-]) aa_length:78 transcript_info:[CG12487-RA seq_release:3] gene_info:[gene symbol:CG12487 FBgn0040808 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (AE003532) CG12487 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG12487-PA [Drosophila melanogaster]gi|24664351|ref|NP_525087.2| CG12487-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(14938932..14939168); ID=FBpp0075426; name=BobA-PA; parent=FBgn0040487,FBtr0075673; dbxref=FlyBase:FBpp0075426,FlyBase_Annotation_IDs:CG12487-PA,GB_protein:AAF49695.1,REFSEQ:NP_525087,GB_protein:AAF49695; MD5=853db26aaa5dee5 [fly-100309-contam.fasta]
  • Brother of Bearded A CG12487-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG12487-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • IP06720p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(14938932..14939168); ID=FBpp0075426; name=BobA-PA; parent=FBgn0040487,FBtr0075673; dbxref=FlyBase:FBpp0075426,FlyBase_Annotation_IDs:CG12487-PA,GB_protein:AAF49695.1,REFSEQ:NP_525087,GB_protein:AAF49695; MD5=853db26aaa5dee5321e9c8ba5783f602; length=78; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(14938932..14939168); ID=FBpp0075426; name=BobA-PA; parent=FBgn0040487,FBtr0075673; dbxref=FlyBase:FBpp0075426,FlyBase_Annotation_IDs:CG12487-PA,GB_protein:AAF49695.1,REFSEQ:NP_525087,GB_protein:AAF49695; MD5=853db26aaa5dee5321e9c8ba5783f602; length=78; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Brother of bearded A OS=Drosophila melanogaster GN=BobA PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:complement(14938932..14939168); ID=FBpp0075426; name=BobA-PA; parent=FBgn0040487,FBtr0075673; dbxref=FlyBase:FBpp0075426,FlyBase_Annotation_IDs:CG12487-PA,GB_protein:AAF49695.1,REFSEQ:NP_525087,GB_protein:AAF49695,FlyMine:FBpp0075426,modMine:FBpp0075426; MD5=853db26aaa5dee5321e9c8ba5783f602; length=78; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:complement(14945832..14946068); ID=FBpp0075426; name=BobA-PA; parent=FBgn0040487,FBtr0075673; dbxref=FlyBase:FBpp0075426,FlyBase_Annotation_IDs:CG12487-PA,GB_protein:AAF49695.1,REFSEQ:NP_525087,GB_protein:AAF49695,FlyMine:FBpp0075426,modMine:FBpp0075426; MD5=853db26aaa5dee5321e9c8ba5783f602; length=78; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(14945832..14946068); ID=FBpp0075426; name=BobA-PA; parent=FBgn0040487,FBtr0075673; dbxref=FlyBase:FBpp0075426,FlyBase_Annotation_IDs:CG12487-PA,GB_protein:AAF49695.1,REFSEQ:NP_525087,GB_protein:AAF49695,FlyMine:FBpp0075426,modMine:FBpp0075426; MD5=853db26aaa5dee5321e9c8ba5783f602; length=78; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0075426 type=protein; loc=3L:complement(14945832..14946068); ID=FBpp0075426; name=BobA-PA; parent=FBgn0040487,FBtr0075673; dbxref=FlyBase:FBpp0075426,FlyBase_Annotation_IDs:CG12487-PA,GB_protein:AAF49695.1,REFSEQ:NP_525087,GB_protein:AAF49695,FlyMine:FBpp0075426,modMine:FBpp0075426; MD5=853db26aaa5dee5321e9c8ba5783f602; length=78; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(14945832..14946068); ID=FBpp0075426; name=BobA-PA; parent=FBgn0040487,FBtr0075673; dbxref=FlyBase:FBpp0075426,FlyBase_Annotation_IDs:CG12487-PA,GB_protein:AAF49695.1,REFSEQ:NP_525087,GB_protein:AAF49695,UniProt/TrEMBL:P83262,FlyMine:FBpp0075426,modMine:FBpp0075426; MD5=853db26aaa5dee5321e9c8ba5783f602; length=78; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 78 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: Notch signaling pathway [IMP]
    sensory organ precursor cell fate determination [IMP]
    cell fate specification [IMP]
    sensory organ development [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTETALVSN FNGVTEKKSL TGASTNLKKL LKTIKKVFKN SKPSKEIPIP NIIYSCNTEE  60
   61 EHQNWLNEQL EAMAIHLH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle