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Protein Overview: Ranbp9-PA, FBpp0...

General Information:
Name(s) found: FBpp0308464 [FlyBase]
Ranbp9-PA / FBpp0081862 [FlyBase]
Description(s) found:
Found 29 descriptions.
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  • type=protein; loc=3R:join(7238416..7238554,7238637..7239281,7239336..7239754,7239813..7240364,7240424..7241212,7241270..7241782); ID=FBpp0308464; name=Ranbp9-PB; parent=FBgn0037894,FBtr0339373; dbxref=FlyBase:FBpp0308464,FlyBase_Annotation_IDs:CG5252-PB; MD5=59926746a270deedc65b23920bf824ba; length=1018; release=r5.56; species=Dmel; [FlyBase]
  • The gene Ranbp9 is referred to in FlyBase by the symbol Dmel\Ranbp9 (CG5252, FBgn0037894). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:7238244..7241864. It has the cytological map location 86E4. It is reported to have molecular function</span>: Ran GTPase binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: intracellular protein transport. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1018 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: intracellular protein transport [IEA]
    Molecular Function: protein transporter activity [IEA]
    binding [IEA]
    Ran GTPase binding [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLQFQNDCG DSVKQAIIEE LQNLLSSDTG VLQQTEKRIK QLEYTEGYGV YLSEIIMNQA  60
   61 HELPLRQIAI VMLTRYVENH WTDDDDVKRK ANGCMASEQA KRTIRNILPN GLYDPNSKIR 120
  121 SSVAHTISTI AATDYPHCWA ELFDIIVKCL GGNEDSIHGA MQVLQDFSYD VEQIKELGPV 180
  181 VIPEVYRIFD SEQNYSIKTR VSAIRILKPL FASIAALITN KEEQSTMMSS ILTNFMDKLM 240
  241 HYLSMNSGAV SSFLLRTEII KVFTHLVNEM PKYINPFMDR VLPIVWQLLT QIAETYVKVS 300
  301 VNQTETSPLA SGDSEEDDEQ TNFQSLIIQI LEFINCILTC NKLRGSIKNV LADLIYITIV 360
  361 YIQLSEEQLE DWHDDPEKFV DDEDDGGVEL TVRMCGRDVL LAINDEFGAN AIQPLQEALG 420
  421 RHFSVADAEK AANNPNWWKI QEACMDAVHA FRDVILAGDS TFDLLNYLTI VRNLLVHQES 480
  481 PPLVGRALWT LSIYSKSDLY NPQMLTEILD VTLCSLSPEK SHILRISAVR TLNGFLQANE 540
  541 TIDGEKRTLL VSKLPGFLDG IMALVPGSKA AVLALLMEAL TFMVKFDAEF AFASQAKITP 600
  601 LAIAVFLKYT EDPYVLETVQ DLIKALCQRK ECLGPLQEKF IPTIVSILGL TGAASTEKQD 660
  661 IALDVLNTIV RYTEPPLNNS LLETAFPAII NCVLHTDDHA VMVAGGECLR SFINVSPEQI 720
  721 CSYKNGEGIN CIMQVVATVL LNPMNSEMTA AGQIGRLVIT IITKMGSMLG QNVDMLLKAV 780
  781 ISKMQNLECL KVIMNLVLIF AHLFLTQMDA VLNFLSTVPG PNGEPAMQFV LTNWLSRQNS 840
  841 FFGNYERKVT TMALCKLFEY GVATQDNRLT TITFKELVDD PTDTRRRTRS VAATTQKWVT 900
  901 IPALVKIFKV LISEYQHFQE GKSDEPLTDS EEDGDDEDAP GNPDKPRYIS DLFESDEDNA 960
  961 EDEQLLQELL KETNYQGDIA DNLQKFLTTF TQNEHFPTFY EHLTEGERLI LLSKVQQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..909] PSI-BLAST 101.0 No description for 2ot8A was found.
    2 View Details [910..1018] MSA 1.274994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle