YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gish-PC

General Information:
Name(s) found: gish-PC / FBpp0082718 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|28571749|ref|NP_524941.3| gilgamesh, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|28381320|gb|AAN13703.2| gilgamesh, isoform C [Drosophila melanogaster] [NCBI NR]
  • The gene gilgamesh is referred to in FlyBase by the symbol Dmel\gish (CG6963, FBgn0250823). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:12098176..12128094. It has the cytological map location 89B9-89B12. Based on sequence similarity, it is predicted to have molecular function</span>: protein serine/threonine kinase activity. There is experimental evidence that it is involved in the biological process</span>: glial cell migration; protein amino acid phosphorylation; Wnt receptor signaling pathway; spermatogenesis. 48 alleles are reported. The phenotypes of these alleles are annotated with: spermatogonium; eye; photoreceptor cell; ommatidium. It has 9 annotated transcripts and 9 annotated polypeptides. [FlyBase]
  • >CG6963-PC translation from_gene[CG6963 gish FBgn0011253] seq_release:3 mol_weight=48685 cds_boundaries:(3R:12,115,468..12,127,611[+]) aa_length:427 transcript_info:[CG6963-RC seq_release:3] gene_info:[gene symbol:gish FBgn0011253 gene_boundaries:(3R:1 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8INB6) CG6963-PC [DrosMelano7227.FASTAC.txt]
  • CG6963-PC, isoform C [Drosophila melanogaster]gi|28571749|ref|NP_524941.3| CG6963-PC [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(12115450..12115561,12118446..12118556,12119709..12119875,12122384..12122498,12122558..12122826,12122897..12123067,12124192..12124272,12125313..12125411,12126967..12127073,12127545..12127596); ID=FBpp0082718; name=gish-PC; parent= [fly-100309-contam.fasta]
  • gilgamesh CG6963-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG6963-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(12115450..12115561,12118446..12118556,12119709..12119875,12122384..12122498,12122558..12122826,12122897..12123067,12124192..12124272,12125313..12125411,12126967..12127073,12127545..12127596); ID=FBpp0082718; name=gish-PC; parent=FBgn0250823,FBtr0083264; dbxref=FlyBase_Annotation_IDs:CG6963-PC,FlyBase:FBpp0082718,GB_protein:AAN13703.2,REFSEQ:NP_524941,GB_protein:AAN13703; MD5=f4d042552247ab84dfa319d2c4a0045e; length=427; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(12115450..12115561,12118446..12118556,12119709..12119875,12122384..12122498,12122558..12122826,12122897..12123067,12124192..12124272,12125313..12125411,12126967..12127073,12127545..12127596); ID=FBpp0082718; name=gish-PC; parent=FBgn0250823,FBtr0083264; dbxref=FlyBase_Annotation_IDs:CG6963-PC,FlyBase:FBpp0082718,GB_protein:AAN13703.2,REFSEQ:NP_524941,GB_protein:AAN13703; MD5=f4d042552247ab84dfa319d2c4a0045e; length=427; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Gilgamesh, isoform C OS=Drosophila melanogaster GN=gish PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(12115450..12115561,12118446..12118556,12119709..12119875,12122384..12122498,12122558..12122826,12122897..12123067,12124192..12124272,12125313..12125411,12126967..12127073,12127545..12127596); ID=FBpp0082718; name=gish-PC; parent=FBgn0250823,FBtr0083264; dbxref=FlyBase_Annotation_IDs:CG6963-PC,FlyBase:FBpp0082718,GB_protein:AAN13703.2,REFSEQ:NP_524941,GB_protein:AAN13703,FlyMine:FBpp0082718,modMine:FBpp0082718; MD5=f4d042552247ab84dfa319d2c4a0045e; length=427; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:join(16289728..16289839,16292724..16292834,16293987..16294153,16296662..16296776,16296836..16297104,16297175..16297345,16298470..16298550,16299591..16299689,16301245..16301351,16301823..16301874); ID=FBpp0082718; name=gish-PC; parent=FBgn0250823,FBtr0083264; dbxref=FlyBase_Annotation_IDs:CG6963-PC,FlyBase:FBpp0082718,GB_protein:AAN13703.2,REFSEQ:NP_524941,GB_protein:AAN13703,FlyMine:FBpp0082718,modMine:FBpp0082718; MD5=f4d042552247ab84dfa319d2c4a0045e; length=427; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(16289728..16289839,16292724..16292834,16293987..16294153,16296662..16296776,16296836..16297104,16297175..16297345,16298470..16298550,16299591..16299689,16301245..16301351,16301823..16301874); ID=FBpp0082718; name=gish-PC; parent=FBgn0250823,FBtr0083264; dbxref=FlyBase_Annotation_IDs:CG6963-PC,FlyBase:FBpp0082718,GB_protein:AAN13703.2,REFSEQ:NP_524941,GB_protein:AAN13703,FlyMine:FBpp0082718,modMine:FBpp0082718; MD5=f4d042552247ab84dfa319d2c4a0045e; length=427; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of A0A0B4KHL4, Gilgamesh, isoform C OS=Drosophila melanogaster GN=gish PE=1 SV=2 [DROME.fasta.20160308]
  • FBpp0082718 type=protein; loc=3R:join(16289728..16289839,16292724..16292834,16293987..16294153,16296662..16296776,16296836..16297104,16297175..16297345,16298470..16298550,16299591..16299689,16301245..16301351,16301823..16301874); ID=FBpp0082718; name=gish-PC; parent=FBgn0250823,FBtr0083264; dbxref=FlyBase_Annotation_IDs:CG6963-PC,FlyBase:FBpp0082718,GB_protein:AAN13703.2,REFSEQ:NP_524941,GB_protein:AAN13703,FlyMine:FBpp0082718,modMine:FBpp0082718; MD5=f4d042552247ab84dfa319d2c4a0045e; length=427; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(16289728..16289839,16292724..16292834,16293987..16294153,16296662..16296776,16296836..16297104,16297175..16297345,16298470..16298550,16299591..16299689,16301245..16301351,16301823..16301874); ID=FBpp0082718; name=gish-PC; parent=FBgn0250823,FBtr0083264; dbxref=FlyBase_Annotation_IDs:CG6963-PC,FlyBase:FBpp0082718,GB_protein:AAN13703.2,REFSEQ:NP_524941,GB_protein:AAN13703,UniProt/TrEMBL:Q8INB6,FlyMine:FBpp0082718,modMine:FBpp0082718; MD5=f4d042552247ab84dfa319d2c4a0045e; length=427; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 427 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: spermatogenesis [IMP]
    Wnt receptor signaling pathway [IMP]
    protein amino acid phosphorylation [IDA][NAS]
    glial cell migration [IMP]
    Molecular Function: ATP binding [IEA]
    protein serine/threonine kinase activity [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSTRQSVST TTGVLMVGPN FRVGKKIGCG NFGELRLGKN LYNNEHVAIK MEPMKSKAPQ  60
   61 LHLEYRFYKL LGSHADNAPD GIPRIYHLGT CGGRYNAMVL ELLGLSLEDL FNICARKFSL 120
  121 KTVLMIAKQL LHRIEYVHSR HLIYRDVKPE NFLIGRTSTK REKIIHIIDF GLAKEYIDLD 180
  181 TNRHIPYREH KSLTGTARYM SINTHMGREQ SRRDDLEALG HMFMYFLRGS LPWQGLKADT 240
  241 LKERYQKIGD TKRATPIEVL CDGHPEEFAT YLRYVRRLDF FETPDYDFLR RLFQDLFDRK 300
  301 GYTDEGEFDW TGKTMSTPVG SLQTGHEVII SPNKDRHNVT AKTNAKGGVA AWPDVPKPGA 360
  361 TLGNLTPADR HGSVQVVSST NGELNPDDPT AGHSNTPITQ QPEVEVVDET KCCCFFKRKK 420
  421 KKSTRQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..350] PSI-BLAST 60.30103 No description for 2chlA was found.
    2 View Details [351..427] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle