YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CG1885-PA, FBpp0...

General Information:
Name(s) found: FBpp0305783 [FlyBase]
CG1885-PA / FBpp0071211 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|7290980|gb|AAF46419.1| CG1885 [Drosophila melanogaster] [NCBI NR]
  • gi|18858061|ref|NP_572507.1| CG1885 [Drosophila melanogaster] [NCBI NR]
  • gi|16768116|gb|AAL28277.1| GH17465p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=X:complement(8793260..8794093); ID=FBpp0305783; name=CG1885-PB; parent=FBgn0030066,FBtr0333606; dbxref=REFSEQ:NP_001259362,GB_protein:AGB95205,FlyBase:FBpp0305783,FlyBase_Annotation_IDs:CG1885-PB; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG1885 (CG1885, FBgn0030066). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:8793065..8794211. It has the cytological map location 8B6. Based on sequence similarity, it is predicted to have molecular function</span>: uroporphyrinogen-III synthase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: tetrapyrrole biosynthetic process. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG1885-PA translation from_gene[CG1885 CG1885 FBgn0030066] seq_release:3 mol_weight=30895 cds_boundaries:(X:8,638,229..8,639,059[-]) aa_length:277 transcript_info:[CG1885-RA seq_release:3] gene_info:[gene symbol:CG1885 FBgn0030066 gene_boundaries:(X:8 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W3B3) CG1885 protein (GH17465P) [DrosMelano7227.FASTAC.txt]
  • (AE003445) CG1885 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG1885-PA [Drosophila melanogaster]gi|16768116|gb|AAL28277.1| GH17465p [Drosophila melanogaster]gi|18858061|ref|NP_572507.1| CG1885-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:complement(8793260..8794093); ID=FBpp0071211; name=CG1885-PA; parent=FBgn0030066,FBtr0071268; dbxref=FlyBase:FBpp0071211,FlyBase_Annotation_IDs:CG1885-PA,GB_protein:AAF46419.1,REFSEQ:NP_572507,GB_protein:AAF46419; MD5=807f56b1aa9ac1bb2 [fly-100309-contam.fasta]
  • CG1885-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • GH17465p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:complement(8793260..8794093); ID=FBpp0071211; name=CG1885-PA; parent=FBgn0030066,FBtr0071268; dbxref=FlyBase:FBpp0071211,FlyBase_Annotation_IDs:CG1885-PA,GB_protein:AAF46419.1,REFSEQ:NP_572507,GB_protein:AAF46419; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:complement(8793260..8794093); ID=FBpp0071211; name=CG1885-PA; parent=FBgn0030066,FBtr0071268; dbxref=FlyBase:FBpp0071211,FlyBase_Annotation_IDs:CG1885-PA,GB_protein:AAF46419.1,REFSEQ:NP_572507,GB_protein:AAF46419; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG1885 OS=Drosophila melanogaster GN=CG1885 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:complement(8793260..8794093); ID=FBpp0071211; name=CG1885-PA; parent=FBgn0030066,FBtr0071268; dbxref=FlyBase:FBpp0071211,FlyBase_Annotation_IDs:CG1885-PA,GB_protein:AAF46419.1,REFSEQ:NP_572507,GB_protein:AAF46419,FlyMine:FBpp0071211,modMine:FBpp0071211; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:complement(8793260..8794093); ID=FBpp0305783; name=CG1885-PB; parent=FBgn0030066,FBtr0333606; dbxref=FlyBase:FBpp0305783,FlyBase_Annotation_IDs:CG1885-PB; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:complement(8899227..8900060); ID=FBpp0071211; name=CG1885-PA; parent=FBgn0030066,FBtr0071268; dbxref=FlyBase:FBpp0071211,FlyBase_Annotation_IDs:CG1885-PA,GB_protein:AAF46419.1,REFSEQ:NP_572507,GB_protein:AAF46419,FlyMine:FBpp0071211,modMine:FBpp0071211; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(8899227..8900060); ID=FBpp0305783; name=CG1885-PB; parent=FBgn0030066,FBtr0333606; dbxref=REFSEQ:NP_001259362,GB_protein:AGB95205,FlyBase:FBpp0305783,FlyBase_Annotation_IDs:CG1885-PB; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(8899227..8900060); ID=FBpp0071211; name=CG1885-PA; parent=FBgn0030066,FBtr0071268; dbxref=FlyBase:FBpp0071211,FlyBase_Annotation_IDs:CG1885-PA,GB_protein:AAF46419.1,REFSEQ:NP_572507,GB_protein:AAF46419,FlyMine:FBpp0071211,modMine:FBpp0071211; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:complement(8899227..8900060); ID=FBpp0305783; name=CG1885-PB; parent=FBgn0030066,FBtr0333606; dbxref=REFSEQ:NP_001259362,GB_protein:AGB95205,FlyBase:FBpp0305783,FlyBase_Annotation_IDs:CG1885-PB; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG1885, isoform A OS=Drosophila melanogaster GN=CG1885 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0071211 type=protein; loc=X:complement(8899227..8900060); ID=FBpp0071211; name=CG1885-PA; parent=FBgn0030066,FBtr0071268; dbxref=FlyBase:FBpp0071211,FlyBase_Annotation_IDs:CG1885-PA,GB_protein:AAF46419.1,REFSEQ:NP_572507,GB_protein:AAF46419,FlyMine:FBpp0071211,modMine:FBpp0071211; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0305783 type=protein; loc=X:complement(8899227..8900060); ID=FBpp0305783; name=CG1885-PB; parent=FBgn0030066,FBtr0333606; dbxref=REFSEQ:NP_001259362,GB_protein:AGB95205,FlyBase:FBpp0305783,FlyBase_Annotation_IDs:CG1885-PB; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:complement(8899227..8900060); ID=FBpp0071211; name=CG1885-PA; parent=FBgn0030066,FBtr0071268; dbxref=FlyBase:FBpp0071211,FlyBase_Annotation_IDs:CG1885-PA,GB_protein:AAF46419.1,REFSEQ:NP_572507,GB_protein:AAF46419,UniProt/TrEMBL:Q9W3B3,FlyMine:FBpp0071211,modMine:FBpp0071211; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:complement(8899227..8900060); ID=FBpp0305783; name=CG1885-PB; parent=FBgn0030066,FBtr0333606; dbxref=REFSEQ:NP_001259362,GB_protein:AGB95205,FlyBase:FBpp0305783,FlyBase_Annotation_IDs:CG1885-PB,UniProt/TrEMBL:Q9W3B3; MD5=807f56b1aa9ac1bb28f08cceebe4c5f5; length=277; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 277 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tetrapyrrole biosynthetic process [IEA]
    Molecular Function: uroporphyrinogen-III synthase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSRQRTVII FKSESESSDV YAETLEKHDF NPVFVPTLSF GFKNLDELRA KLQNPDKYAG  60
   61 IIFTSPRCVE AVAESLNLGE LPGGWKMLHN YAVGEVTHNL ALSTLDQLFT HGKQTGNARA 120
  121 LGDYIVDTFD GSRALPLLLP CGNLATDTLL SKLAENGFSV DACEVYETRC HPELGANVER 180
  181 ALEIYGESIE FLAFFSPSGV NCAQQYFTSR QLSMDKWKLV AIGPSTRRAL ESLGQKVYCT 240
  241 AERPTVEHLV KVLLNPQDSR ERLLKERERM AAIENNN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..277] PSI-BLAST 51.69897 Uroporphyrinogen III synthase (U3S, HemD)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • uroporphyrinogen-III synthase activity
    		•  3.75954315324218 bayes_pls_golite062009
  • binding
    		•  1.39689732651231 bayes_pls_golite062009
  • catalytic activity
    		•  1.13824203225664 bayes_pls_golite062009
  • hydro-lyase activity
    		•  0.290711782955013 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle