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Protein Overview: SPBC8E4.03

General Information:
Name(s) found: SPBC8E4.03 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • agmatinase 2 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 413 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDALink to PubMed article]
    fungal-type vacuole [IDALink to PubMed article]
    Biological Process: urea metabolic process [ICLink to PubMed article]
    cellular amino acid metabolic process [RCALink to PubMed article]
    Molecular Function: manganese ion binding [NASLink to PubMed article]
    agmatinase activity [NASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTYQKIIQL ALLLSGVCGA LASIDTDSHL SPKVLEKLRP TENLAYEDDS LDDDTWRSKR  60
   61 WEFDYQYSGI STFAHLPHVR CLVEQSEDFD IAIIGVPFDT AVSHRPGARF GPKGIRSASS 120
  121 RQMAIRGFNP SLNVNPYESW AKILDCGDIP VSSYDNQLAV RQMTEGYIDL LSRKATASPA 180
  181 SNNLKTAGLA KDGIFHPRLI TLGGDHSIGL ASLRALGHFY GNVSVIHFDS HLDTWNPKRY 240
  241 YPSYWHSDRA DFTHGTMFWM ASKEGLINNG TSIHAGLRTR LSGTDYYDYE EDNRVGFTFI 300
  301 EAQEIDEIGV NGIVERIKQV VGDTLVYLSI DIDVVDPGLA PGTGTPETGG WTTREMKSIL 360
  361 RKLDGHLNLV GAEVVEVSPP YDDRAESTSL AASDFIFEIL SSMVKHPLYD VKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run ste13 No Comments Unpublished Data

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..413] PSI-BLAST 77.0 Proclavaminate amidino hydrolase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • agmatinase activity
    		•  3.73238467801147 bayes_pls_golite062009
  • hydrolase activity
    		•  3.56322886233131 bayes_pls_golite062009
  • arginase activity
    		•  3.50076504115011 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.72243397396987 bayes_pls_golite062009
  • catalytic activity
    		•  1.68836803454021 bayes_pls_golite062009
  • protein deacetylase activity
    		•  1.29904902150637 bayes_pls_golite062009
  • histone deacetylase activity
    		•  1.25334418126662 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
    		•  1.01223037319069 bayes_pls_golite062009
  • deacetylase activity
    		•  0.616633535035513 bayes_pls_golite062009
  • transcription factor binding
    		•  0.48632720319646 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.359136428158927 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.13614857264874 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  0.0917282383800223 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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