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Protein Overview: trp3

General Information:
Name(s) found: trp3 / SPCC1442.09 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • anthranilate synthase component I [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 489 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISS]
    cytosol [IDALink to PubMed article]
    anthranilate synthase complex [ISS]
    Biological Process: tryptophan biosynthetic process [ISS]
    Molecular Function: anthranilate synthase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIYPDLKQV QELAEKHKAN KIPIYGVIPA DMLTPSVAYL KLNQGKKYSF ILESVTQGES  60
   61 VSRYSFIGSP YRILMANGKT DPLARLEREL KEVKTAPVEG LPSFSGGAVG YVSYDCIKYF 120
  121 EPTTEMPLED TLGLPEAMFF MTDDLVAFDH AYQTVKIISH VCIQQGRPIE EAYEAAVFKI 180
  181 NMLKKKLESP EIPLPEQKKV HLGYEAKSNV GEDGYKAFVS NLKEHIFNGD IFQAVPSQRI 240
  241 ARRTDLHPFN LYRHLRTVNP SPYMFYIHCD DFDIIGASPE LLVKSEHGRI INHPIAGTVP 300
  301 RGKTKEEDEA YAKDLLASVK DRAEHVMLVD LARNDVSRVC DLDTTSVDKL MTIEKFSHVQ 360
  361 HLVSQVSGVL RPDKTRFDAF RSIFPAGTVS GSPKVRAIQL VYGLEKEKRG IYAGAVGRWG 420
  421 YEDDNMDTCI AIRTMVYKDG TVYLQAGGGI VFDSDEQDEY VETLNKLRSN VTAIEETEKL 480
  481 YAEEENSSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..489] PSI-BLAST 124.0 Anthranilate synthase aminodeoxyisochorismate synthase/lyase subunit, TrpE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • anthranilate synthase activity
    		•  11.4918303265177 bayes_pls_golite062009
  • 4-amino-4-deoxychorismate synthase activity
    		•  9.91522831720207 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  9.57649905871948 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  2.42362294309332 bayes_pls_golite062009
  • catalytic activity
    		•  2.11110806828104 bayes_pls_golite062009
  • binding
    		•  1.73874372115438 bayes_pls_golite062009
  • lyase activity
    		•  0.454734323696838 bayes_pls_golite062009
  • protein binding
    		•  0.323833479841771 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle