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Protein Overview: SPBC17D1.02

General Information:
Name(s) found: SPBC17D1.02 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • diphthamide biosynthesis protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 503 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of translation [IC]
    peptidyl-diphthamide biosynthetic process from peptidyl-histidine [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFELSAPVP LSDNSEAILE KEIGETVKIE GDLVEVYEIN RTVDFIKSGN YNSVALQFPD  60
   61 EHLADSGKVA SILTNLVEAN VQILADTNYG SCCVDEVAAE HMSADAIVHY GRACLSPTSR 120
  121 LPVLYVFGRL PINLHKLEKC LTIPLDQNIL LVSDTRWYYA QDSILKSLKT LGYQNVYESH 180
  181 LKERIEPNLE EASTSYTIPG RTYSLPKSLS LQDMTLLYIG PDSPTLSSIL MSHYSLVNQF 240
  241 LSFDPLSNKI VEESSFTGAK LRRRYALVQR CRDAGVIGIV IGTLGVHRYL HVLNQLRKMI 300
  301 LNAGKKPYML AVGKLNPAKL ANFQEIECFV LIACGENSLI DSKEFYRPIV TPFELVKALS 360
  361 SDMSWNNDFI LSFDEVLKLS EGKQSKEPSE VLTEESAEPH FSLITGKFVN STPMRHLDVT 420
  421 LETADAKNND SSSASIEKRG MRSLAVNGVY SPAAAFLQSK SWSGLDSVDE GEGPSKLYEG 480
  481 QSGIAKGYVG EGSKEKIQRD FGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] MSA 2.050962 View MSA. Confident ab initio structure predictions are available.
    2 View Details [146..365] MSA 3.053961 View MSA. No confident structure predictions are available.
    3 View Details [366..503] MSA 1.05296 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle