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Protein Overview: SPAC17C9.12

General Information:
Name(s) found: SPAC17C9.12 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • MSP domain [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 319 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: inositol metabolic process [ISSLink to PubMed article]
    protein targeting to ER [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALECDSTIV FPRPLTRLVK CDLELRNTAP YPIGFKVKTT APKQYCVRPN GGRIEANSAV  60
   61 SVEVILQPLD HEPAPGTKCR DKFLVQSTEL KPELQGMDIA DIWTQVSKAN ISERKIRCVY 120
  121 SEGPSTANAH ANAHHQPAQT TTTSIPTSAT DNYTTVNGNV NQSYSKGIDG TALPSTHANP 180
  181 VAAPSTATTQ HTQLPKTSAV SHQKPHEAPS TAVKAPTATV AENEPYPKPQ SVPTTTSPNN 240
  241 ENNALRSTAN VINNTRQSTA TSPSMFAGNS GNQIGLARVS SSFGRPTSGA KVVPQIHNTV 300
  301 TVQTAFLLAI ICFLIGLLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 32.045757 Major sperm protein, MSP
    2 View Details [126..223] MSA 3.072996 View MSA. No confident structure predictions are available.
    3 View Details [224..319] deduced N/A Confident ab initio structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  1.38752281572098 bayes_pls_golite062009
  • binding
    		•  1.31179124589449 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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