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Protein Overview: atl1

General Information:
Name(s) found: atl1 / SPAC1250.04c [Sanger Pombe]
Description(s) found:
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  • pir||T37558 probable methyltransferase - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74625974|sp|Q9UTN9.1|ATL1_SCHPO RecName: Full=Alkyltransferase-like protein 1 [NCBI NR]
  • gi|5830483|emb|CAB54827.1| alkyltransferase-like protein Atl1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115770|ref|NP_594858.1| alkyltransferase-like protein Atl1 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • alkyltransferase-like protein Atl1 [Sanger Pombe]
  • |atl1||alkyltransferase-like protein Atl1|Schizosaccharomyces pombe|chr 1|||Manual [Sanger Pombe]
  • Alkyltransferase-like protein 1 OS=Schizosaccharomyces pombe GN=atl1 PE=1 SV=1 [Swiss-Prot]
  • PUTATIVE DNA REPAIR METHYLTRANSFERASE: Q9UTN9; [pompepVF.fasta]
  • Putative methyltransferase [pompep4896]
  • |||putative DNA repair methyltransferase DNA-binding domain [pompepnew.fasta]
  • SPAC1250.04c protein [4896.FASTAC]
  • |||DNA methyltransferase (predicted)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • putative methyltransferase [Schizosaccharomyces pombe]gi|5830483|emb|CAB54827.1| SPAC1250.04c [Schizosaccharomyces pombe]gi|7492724|pir||T37558 probable methyltransferase - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||DNA methyltransferase |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q9UTN9) Putative methyltransferase [pompep4896_normal_reversed]
  • Alkyltransferase-like protein 1 [nr-271106-contam.fasta]
  • SPAC1250.04c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC1250.04c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Alkyltransferase-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atl1 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 108 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: DNA dealkylation involved in DNA repair [IDALink to PubMed article][IMPLink to PubMed article]
    Molecular Function: O6-alkylguanine-DNA binding [IDALink to PubMed article]
    [NOT]methylated-DNA-[protein]-cysteine S-methyltransferase activity [IDALink to PubMed article]
    damaged DNA binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMDEFYTKV YDAVCEIPYG KVSTYGEIAR YVGMPSYARQ VGQAMKHLHP ETHVPWHRVI  60
   61 NSRGTISKRD ISAGEQRQKD RLEEEGVEIY QTSLGEYKLN LPEYMWKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] PSI-BLAST 32.045757 ADA O6-METHYLGUANINE-DNA METHYLTRANSFERASE FROM ESCHERICHIA COLI

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • methylated-DNA-[protein]-cysteine S-methyltransferase activity
    		•  3.81641972619245 bayes_pls_golite062009
  • S-methyltransferase activity
    		•  2.66007025371147 bayes_pls_golite062009
  • transferase activity
    		•  1.93166534470568 bayes_pls_golite062009
  • catalytic activity
    		•  1.90838528948382 bayes_pls_golite062009
  • DNA binding
    		•  1.54553435062678 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.49720271661049 bayes_pls_golite062009
  • binding
    		•  1.30758209326705 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.26332746912934 bayes_pls_golite062009
  • methyltransferase activity
    		•  1.14625481859451 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.13184530961695 bayes_pls_golite062009
  • transcription factor activity
    		•  0.99095733801135 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle