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Protein Overview: SPBC16G5.05c

General Information:
Name(s) found: SPBC16G5.05c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • MSP domain [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 383 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [ICLink to PubMed article]
    integral to membrane [ISSLink to PubMed article]
    endoplasmic reticulum [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: inositol metabolic process [ISSLink to PubMed article]
    protein targeting to ER [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVECSGELF FYPPFTTMSK ELISVHNPNP EPVIFKVKTT APKHYCVRPN SGKIEPKSTV  60
   61 NVQVLLQAMK EEPAPDFKCR DKFLIQSMAI GDADTSNVEN YHEFWTEMEK QGRSIFDRKI 120
  121 RCVYSTKQPP QSADKQVENT STSNPPVSVE GSENLASSVG GPTAVGVSLD EAQNDFNGAK 180
  181 DHLSNGVNTV VPDSTFRSTF ESAQIPDASV VQTVVTDADN GAASVKDTIV TAESASSKGA 240
  241 DVARSKVQDI IDNEIPKPSE SPRRSVSSTP PVHPPPPVPQ NLSAVNEEFD TKKNDFDSKL 300
  301 PESTPAVEKV SENLGSETRE SLQGAKPAAG AHSSDNALEQ IKPSYSADPS SSTGASLTES 360
  361 PGIPPNIVII LCLIFFLIGY LFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] PSI-BLAST 22.39794 Solution structure of the MSP domain of mouse VAMP-associated proteinA
    2 View Details [165..383] FFAS03 1.08 No description for 2j63A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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