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Protein Overview: SPBC28F2.09

General Information:
Name(s) found: SPBC28F2.09 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • transcription factor TFIIA complex large subunit [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 369 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    transcription factor TFIIA complex [ISSLink to PubMed article]
    Biological Process: regulation of transcription [ICLink to PubMed article]
    transcription initiation from RNA polymerase II promoter [ISSLink to PubMed article]
    Molecular Function: general RNA polymerase II transcription factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSIVGEVY HHVILDVIAN SRSDFEENGV DDATLRELQN LWQSKLVATD VATFPWAQAP  60
   61 VGTFPIGQLF DPVSGLRTDS LDVTAPAVAN SPILNNIAAI RAVQQMDTFA QQHGNSNYYS 120
  121 PPTPSLPQSA TNISFDSSAI PNVQSNPNNT APFPSYSSNS LQLPTNQTAD SPIINDHSTA 180
  181 NVTSTGQEHA PDSSSTNSFG GLLLPNQNSP KKSELGETES SNTTPANSRN DVPQTDGAIH 240
  241 DLDDAGSPSN FESNRFAIAQ KADAEIYEVL KKNRILQIDG TIEDNEDEKK PPVDTPSDEA 300
  301 INSDLDDPDS DEAPETEEGS DIGQAIVLCL YDKVNHHKNK WKCVFRDGVV GVNGKDYLFF 360
  361 KANGEFEWI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] PSI-BLAST 6.221849 Sec24
    2 View Details [188..369] PSI-BLAST 27.69897 Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle