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Protein Overview: SPBC3H7.12

General Information:
Name(s) found: SPBC3H7.12 [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • sequence orphan [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: RAVE complex [IPILink to PubMed article]
    nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of proton-transporting ATPase activity, rotational mechanism [TASLink to PubMed article]
    vacuolar proton-transporting V-type ATPase complex assembly [TASLink to PubMed article]
    response to calcium ion [IMPLink to PubMed article]
    response to drug [IMPLink to PubMed article]
    vacuolar acidification [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTEIDASVI VKEKEWLETN VLPEFWESMS EGLKEALNLI SSDDPTVLVF TSPKTDAVKG  60
   61 IVSRSSSNVV RVNVTAKVGR TTHVLKLKDS AIIHLDQILN LSNYMHYALY CLPRLRHNTE 120
  121 RAIKELQEIL HAIVCLLHSI MQEESEKEEI PSNASSISLK SQNSIVSRTS NPFSCLNHSP 180
  181 RQIHKTVRNH LFSPPLPSNL ALSFSISNAS VCLHLFRLSG PNEVLESFAK NSVDIEMLKP 240
  241 FVSQRIDAFS QDPILLAVTA KLSALQKKVN DVSYRFKTIS SSLYGAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..197] deduced N/A No confident structure predictions are available.
    2 View Details [198..287] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle