YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gana-1

General Information:
Name(s) found: gana-1 / CE06273 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00011095 locus:gana-1 status:Confirmed UniProt:Q21801 protein_id:CAB00120.1 [WormBase]
  • pir||T24018 hypothetical protein R07B7.11 - Caenorhabditis elegans [NCBI NR]
  • gi|3878996|emb|CAB00120.1| C. elegans protein R07B7.11, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17562946|ref|NP_506031.1| GAlactosidase/N-Acetylgalactosaminidase family member (gana-1) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE06273 WBGene00011095 locus:gana-1 alpha-N-acetylgalactosaminidase status:Confirmed TR:Q21801 protein_id:CAB00120.1 [wormpep150.fasta]
  • 06273 WBGene00011095 alpha-N-acetylgalactosaminidase status:Confirmed TR:Q21801 protein_id:CAB00120.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • Alpha-N-Acetylgalactosaminidase precursor (51.4 kD) (5M569) [Caenorhabditis elegans]gi|3878996|emb|CAB00120.1| Hypothetical protein R07B7.11 [Caenorhabditis elegans]gi|7506398|pir||T24018 hypothetical protein R07B7.11 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • CE06273 WBGene00011095 alpha-N-acetylgalactosaminidase status:Confirmed TR:Q21801 protein_id:CAB00120.1 [wormpep132.fasta]
  • 06273 WBGene00011095 locus:gana-1 alpha-N-acetylgalactosaminidase status:Confirmed TR:Q21801 protein_id:CAB00120.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • alpha-N-acetylgalactosaminidase status:Partially_confirmed TR:Q21801 protein_id:CAB00120.1 [wormpep115.fasta.reversed]
  • CE06273 alpha-N-acetylgalactosaminidase status:Partially_confirmed TR:Q21801 protein_id:CAB00120.1 [wormpep80.hongbin]
  • CE06273 WBGene00011095 locus:gana-1 alpha-N-acetylgalactosaminidase status:Confirmed UniProt:Q21801_CAEEL protein_id:CAB00120.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE06273 WBGene00011095 locus:gana-1 alpha-N-acetylgalactosaminidase status:Confirmed UniProt:Q21801_CAEEL protein_id:CAB00120.1| [wormORF-contam.fasta]
  • R07B7.11 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein R07B7.11 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE06273 WBGene00011095 locus:gana-1 alpha-N-acetylgalactosaminidase status:Confirmed UniProt:Q21801 protein_id:CAB00120.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE06273 WBGene00011095 locus:gana-1 status:Confirmed UniProt:Q21801 protein_id:CAB00120.1 [wormpep246-ecoli-contam.fasta]
  • GAlactosidase/N-Acetylgalactosaminidase OS=Caenorhabditis elegans GN=gana-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 451 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: glycoside catabolic process [IMPLink to PubMed article]
    carbohydrate metabolic process [IEALink to PubMed article]
    Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLLPLLFC VGAFCLDNGL GRTPPMGWMS WTAFYCEIDC VKHPTGCINE QLYKDMADQL  60
   61 VSGGYDKVGY KSVHIDDCWS EMERDSHGIL VANKTRFPSG MKALAKYMHD RGLKFGIYED 120
  121 YGTKTCGGYP GSYKHEKVDA QTFAAWDVDY LKLDGCNIDQ AMMPIGYPLF EKELNETGRP 180
  181 IMYSCSWPAY LIDHPELVNY NLIGKYCNTW RNFDDINSSW KSIISIISYY DKMQDKHIPT 240
  241 HGPGKWHDPD MLVIGNKGIT LDMSISQFTV WCIWSAPLIM SNDLRIIGDS FKDVLKNKEA 300
  301 IKINQDPLGI MGRLIKNSTD IGVYVKQITP SKGDKKSFAF AYLNRNEKEG YKRIEIQLAS 360
  361 IGLTDPAGYY VHDIWSHVDL GLLRSGDSIV VSIAPAGSVF FRADLASLHQ PKGKRRYKFD 420
  421 NSNVVYEFER EQSQLGRFDF GDYLRTNRVQ F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..451] PSI-BLAST 128.0 Melibiase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • galactosidase activity
    		•  6.88471099389411 bayes_pls_golite062009
  • alpha-galactosidase activity
    		•  6.44456077417793 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  6.26329339735894 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  5.92180849080637 bayes_pls_golite062009
  • hydrolase activity
    		•  3.98075336331567 bayes_pls_golite062009
  • hexosaminidase activity
    		•  3.21852337137039 bayes_pls_golite062009
  • beta-N-acetylhexosaminidase activity
    		•  2.69072465526737 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  2.06059323252952 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • glucosidase activity
    		•  1.85545420386612 bayes_pls_golite062009
  • chitinase activity
    		•  1.8132391603727 bayes_pls_golite062009
  • alpha-glucosidase activity
    		•  1.00973231642658 bayes_pls_golite062009
  • binding
    		•  0.800444849784015 bayes_pls_golite062009
  • amylase activity
    		•  0.748967897302847 bayes_pls_golite062009
  • beta-glucuronidase activity
    		•  0.55376725638834 bayes_pls_golite062009
  • sugar binding
    		•  0.52048704356718 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.4998423581103 bayes_pls_golite062009
  • mannosidase activity
    		•  0.48536369022293 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.23234868908353 bayes_pls_golite062009
  • receptor binding
    		•  0.140779552506852 bayes_pls_golite062009
  • beta-galactosidase activity
    		•  0.0137149865738109 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle