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Protein Overview: rpn-8

General Information:
Name(s) found: rpn-8 / CE18135 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00004464 locus:rpn-8 status:Confirmed UniProt:O61792 protein_id:CCD65169.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 362 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTNKDGDV ATVKAVDVLK QKAGAHHCLG NVHANLPVNK VTVHPLVLLS VVDHFNRVSK  60
   61 TQSVKRVVGV LLGSMKKDKT LDIGNSFAVP FDEDDKDKST WFLDMDYLES MYGMFYKVAA 120
  121 KEKIVGWYHT GPKLHKNDIA INEQLKRFCP NPVLVIIDAE PKNIGLPTEA YIEVQEVHDD 180
  181 GTPPIKTFEH VPSDIGAEEA EEVGVEHLLR DIKDQTAGTL SQRITDQLMG LRGLQSQLES 240
  241 IEKYLHDIVR GTLPVNHHVI YYVQEVLNLL PDVTHPDYIV SQNVQTNDQL MCVYMGSLVR 300
  301 SVVALHNLID NKISLQKAEK EQETGEAEKK KDEKDKKDKK DEKKDEKKEK DSKSSTPNTP 360
  361 KK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..251] PSI-BLAST 48.30103 No description for 2o95A was found.
    2 View Details [252..362] MSA 2.189993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle