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Protein Overview: CE19125

General Information:
Name(s) found: CE19125 [WormBase]
Description(s) found:
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  • WBGene00012645 locus:mrpl-22 status:Confirmed UniProt:Q9XX18 protein_id:CAA21022.1 [WormBase]
  • pir||T26733 hypothetical protein Y39A1A.6 - Caenorhabditis elegans [NCBI NR]
  • gi|3880849|emb|CAA21022.1| C. elegans protein Y39A1A.6, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17555696|ref|NP_499340.1| hypothetical protein Y39A1A.6 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE19125 WBGene00012645 status:Confirmed TR:Q9XX18 protein_id:CAA21022.1 [wormpep150.fasta]
  • 19125 WBGene00012645 status:Confirmed TR:Q9XX18 protein_id:CAA21022.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • mitochondrial ribosomal protein L22 like (30.5 kD) (3L707) [Caenorhabditis elegans]gi|3880849|emb|CAA21022.1| Hypothetical protein Y39A1A.6 [Caenorhabditis elegans]gi|7509685|pir||T26733 hypothetical protein Y39A1A.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Confirmed TR:Q9XX18 protein_id:CAA21022.1 [wormpep115.fasta.reversed]
  • CE19125 status:Confirmed TR:Q9XX18 protein_id:CAA21022.1 [wormpep80.hongbin]
  • CE19125 WBGene00012645 status:Confirmed UniProt:Q9XX18_CAEEL protein_id:CAA21022.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE19125 WBGene00012645 status:Confirmed UniProt:Q9XX18_CAEEL protein_id:CAA21022.1| [wormORF-contam.fasta]
  • Y39A1A.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y39A1A.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE19125 WBGene00012645 status:Confirmed UniProt:Q9XX18 protein_id:CAA21022.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE19125 WBGene00012645 locus:mrpl-22 status:Confirmed UniProt:Q9XX18 protein_id:CAA21022.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Mitochondrial Ribosomal Protein, Large OS=Caenorhabditis elegans GN=mrpl-22 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 260 amino acids

    Gene Ontology:
    Cellular Component: large ribosomal subunit [IEALink to PubMed article]
    ribosome [IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: structural constituent of ribosome [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRVLVRTGS EACRAVSTST AVLSVHPVVK SEDLSAKEIW DRRSKLRVPK LQKDEQLSSK  60
   61 VYFAPEWDLE KKPNLDEGFV NPLKGYGMTP EKWEYYNKVV WPPNYIVPET GLPKPKEVFH 120
  121 CKESVHFSPK RMWAACQLVW KMNVDEAITQ LDMQQLKACN LLMDTIKKAK SRAADEFHIE 180
  181 YPSQMYVADA FPVQSNIVKG ARRHAHDNWN TIRYRYIHIF VRLEEGPAPQ QKQRHPQKNG 240
  241 WDHMDEYYNY LRSRTVKYSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] deduced N/A No confident structure predictions are available.
    2 View Details [113..260] PSI-BLAST 28.69897 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.50

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle