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Protein Overview: srab-1

General Information:
Name(s) found: srab-1 / CE19668 [WormBase]
Description(s) found:
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  • WBGene00015446 locus:srab-1 status:Partially_confirmed UniProt:Q9GZD4 protein_id:CCD63014.1 [WormBase]
  • gi|9798117|gb|AAF98595.1| Serpentine receptor, class ab (class a-like) protein 1 [Caenorhabditis elegans] [NCBI NR]
  • pir||T33767 hypothetical protein C04F5.4 - Caenorhabditis elegans [NCBI NR]
  • gi|17557628|ref|NP_504366.1| Serpentine Receptor, class AB (class A-like) family member (srab-1) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE19668 WBGene00015446 locus:srab-1 7TM chemoreceptor, srab family status:Partially_confirmed TR:Q9GZD4 protein_id:AAF98595.1 [wormpep150.fasta]
  • 19668 WBGene00015446 status:Partially_confirmed TR:Q9GZD4 protein_id:AAF98595.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein family member, with at least 4 transmembrane domains (5F578) [Caenorhabditis elegans]gi|9798117|gb|AAF98595.1| Hypothetical protein C04F5.4 [Caenorhabditis elegans]gi|7495372|pir||T33767 hypothetical protein C04F5.4 - Caenorhabditis ele [nrdb_11152004_Chlamydomonas]
  • CE19668 WBGene00015446 status:Partially_confirmed TR:Q9GZD4 protein_id:AAF98595.1 [wormpep132.fasta]
  • 19668 WBGene00015446 locus:srab-1 7TM chemoreceptor, srab family status:Partially_confirmed TR:Q9GZD4 protein_id:AAF98595.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Partially_confirmed TR:Q9GZD4 protein_id:AAF98595.1 [wormpep115.fasta.reversed]
  • CE19668 status:Predicted TR:Q9GZD4 protein_id:AAF98595.1 [wormpep80.hongbin]
  • CE19668 WBGene00015446 locus:srab-1 7TM chemoreceptor, srab family status:Partially_confirmed UniProt:Q9GZD4_CAEEL protein_id:AAF98595.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE19668 WBGene00015446 locus:srab-1 7TM chemoreceptor, srab family status:Partially_confirmed UniProt:Q9GZD4_CAEEL protein_id:AAF98595.1| [wormORF-contam.fasta]
  • Serpentine receptor, class ab (class a-like) protein 1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Serpentine Receptor, class AB (class A-like) family member (srab-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE19668 WBGene00015446 locus:srab-1 7TM chemoreceptor, srab family status:Partially_confirmed UniProt:Q9GZD4 protein_id:AAF98595.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE19668 WBGene00015446 locus:srab-1 7TM chemoreceptor, srab family status:Partially_confirmed UniProt:Q9GZD4 protein_id:CCD63014.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE19668 WBGene00015446 locus:srab-1 status:Partially_confirmed UniProt:Q9GZD4 protein_id:CCD63014.1 7TM GPCR, serpentine receptor class ab (A-like)(Srab) [wormpep246-ecoli-contam.fasta]
  • Serpentine Receptor, class AB (Class A-like) OS=Caenorhabditis elegans GN=srab-1 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 341 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: sensory perception of chemical stimulus [IEALink to PubMed article]
    Molecular Function: transmembrane receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNETDCQVM AEVATSSFLR TSLGMTTLLC ILCVPCTIYS FLAIQKATKL HFNSKCIFHT  60
   61 LTIFAFIHMI VRIILHGKDL LNYVGPWMSG CEIFPSRSRC ELRKLYKISA FVVEVTPFVL 120
  121 TAERFVATFR ARHYENRYKW CGVLLNIFHI SLALFLFTIQ SSEKVGGDII YYCWMSSTGN 180
  181 RYMLNLPIFV IVFSQLITIP ALLYLLRKNE KFREASLQKR STLSQRYQLS QNLQTLTKFR 240
  241 IVSTVTWIYV TYNAAATFGV HFFLKSMSSA GQFAIIEIVH CLPLYYLILI FLMVKEDKKP 300
  301 HRQFSIKVDH YEPQYFNDLQ KFFDQSFDKV KKTKSVTFVV S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] PSI-BLAST 48.522879 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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