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Protein Overview: CE25548

General Information:
Name(s) found: CE25548 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00022104 status:Confirmed UniProt:Q95Y54 protein_id:CCD72052.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 352 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEALink to PubMed article]
    Molecular Function: aminocarboxymuconate-semialdehyde decarboxylase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPICEFSATS KSRKIDVHAH VLPKNIPDFQ EKFGYPGFVR LDHKEDGTTH MVKDGKLFRV  60
   61 VEPNCFDTET RIADMNRANV NVQCLSTVPV MFSYWAKPAD TEIVARFVND DLLAECQKFP 120
  121 DRLVPLGTLP MNDVQRAVEE VKRCVSMGIK GFEVGSHVAE KSLDHRDFWP LYKICEELSV 180
  181 VLFVHPWDMH MWDGRLDKYW MPWLVGMPSE TAQAICSVLM GNILVLFPKL KLCFAHGGGA 240
  241 YPQIRGRVSH GWNVRPDLCA GKCKVAPNKL DGLLWTDSLV HDPKALELLI NTVGKEHIVL 300
  301 GTDYPFPLGE LEVGRVVEEY KPFSAKDRED LLWKNAVKML DIDENLLFNK DF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..352] PSI-BLAST 60.221849 No description for 2hbvA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aminocarboxymuconate-semialdehyde decarboxylase activity
    		•  3.63294514902631 bayes_pls_golite062009
  • catalytic activity
    		•  1.70199291046899 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.60895003474033 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
    		•  0.787370269329878 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  0.573107361273483 bayes_pls_golite062009
  • hydrolase activity
    		•  0.233324056576153 bayes_pls_golite062009
  • dihydroorotase activity
    		•  0.203044795244555 bayes_pls_golite062009
  • deaminase activity
    		•  0.18698811376434 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle