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Protein Overview: CE28706

General Information:
Name(s) found: CE28706 [WormBase]
Description(s) found:
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  • WBGene00012957 status:Partially_confirmed UniProt:Q95Q21 protein_id:CAC42375.2 [WormBase]
  • gi|17510077|ref|NP_493013.1| hypothetical protein Y47H9C.15 [Caenorhabditis elegans] [NCBI NR]
  • gi|15718329|emb|CAC42375.2| Hypothetical protein Y47H9C.15 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE28706 WBGene00012957 status:Predicted TR:Q95Q21 protein_id:CAC42375.2 [wormpep150.fasta]
  • 28706 WBGene00012957 status:Predicted TR:Q95Q21 protein_id:CAC42375.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, putative nuclear protein, with a coiled coil-4 domain (1M482) [Caenorhabditis elegans]gi|15718329|emb|CAC42375.2| Hypothetical protein Y47H9C.15 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:Q95Q21 protein_id:CAC42375.2 [wormpep115.fasta.reversed]
  • CE28706 status:Predicted TR:Q95Q21 protein_id:CAC42375.2 [wormpep80.hongbin]
  • CE28706 WBGene00012957 status:Predicted UniProt:Q95Q21_CAEEL protein_id:CAC42375.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28706 WBGene00012957 status:Predicted UniProt:Q95Q21_CAEEL protein_id:CAC42375.2| [wormORF-contam.fasta]
  • Hypothetical protein Y47H9C.15 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y47H9C.15 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE28706 WBGene00012957 status:Predicted UniProt:Q95Q21 protein_id:CAC42375.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE28706 WBGene00012957 status:Partially_confirmed UniProt:Q95Q21 protein_id:CAC42375.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_Y47H9C.15 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 190 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: cysteine-type endopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLPRQFEQL NPGHVNLIAN LGGIPESEYD NLEEAPRKSA GGGPTRRQGA KEKFEEEATK  60
   61 NKARERKWVE EPIFWNHHKK FLTSLQKNGF DRPRRTQSQK LAEQNRNRYA RKKAALEQSD 120
  121 KVESDEEEKL SESDEDEEGR GAVDEFEFES NDVPSPQAPP TPSIADPGPT ASSSPLTQDP 180
  181 ASNATGFSGM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..190] FFAS03 1.19 crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle