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Protein Overview: CE29308

General Information:
Name(s) found: CE29308 [WormBase]
Description(s) found:
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  • WBGene00017997 locus:mrpl-1 status:Confirmed UniProt:Q7KPW7 protein_id:CCD63770.1 [WormBase]
  • gi|40445442|gb|AAR85905.1| Hypothetical protein F33D4.5 [Caenorhabditis elegans] [NCBI NR]
  • gi|17540136|ref|NP_501257.1| hypothetical protein F33D4.5 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE29308 WBGene00017997 status:Confirmed TR:Q7KPW7 protein_id:AAR85905.1 [wormpep150.fasta]
  • 29308 WBGene00017997 status:Confirmed TR:Q7KPW7 protein_id:AAR85905.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • ribosomal protein L1 (42.7 kD) (4I472) [Caenorhabditis elegans]gi|40445442|gb|AAR85905.1| Hypothetical protein F33D4.5 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE29308 status:Confirmed TR:O44187 protein_id:AAL02508.1 [wormpep80.hongbin]
  • CE29308 WBGene00017997 status:Confirmed UniProt:Q7KPW7_CAEEL protein_id:AAR85905.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29308 WBGene00017997 status:Confirmed UniProt:Q7KPW7_CAEEL protein_id:AAR85905.1| [wormORF-contam.fasta]
  • F33D4.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F33D4.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29308 WBGene00017997 status:Confirmed UniProt:Q7KPW7 protein_id:AAR85905.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29308 WBGene00017997 status:Confirmed UniProt:Q7KPW7 protein_id:CCD63770.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE29308 WBGene00017997 locus:mrpl-1 status:Confirmed UniProt:Q7KPW7 protein_id:CCD63770.1 [wormpep246-ecoli-contam.fasta]
  • Mitochondrial Ribosomal Protein, Large OS=Caenorhabditis elegans GN=mrpl-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 377 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IEALink to PubMed article]
    large ribosomal subunit [IEALink to PubMed article]
    ribosome [IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    translation [IEALink to PubMed article]
    Molecular Function: RNA binding [IEALink to PubMed article]
    structural constituent of ribosome [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSFVRQTVS STGSNILRPA SADVIQIRGR KRALKQTITR QQKLERRMKR EEKEAARKQY  60
   61 SFMEKINIRR MKNLLSPSQQ FPGRLNIDDE ANLPEKPTLD VFIKSHFKTQ YYTVSEALDM 120
  121 HRELQSPSIY NNPNAPIRLR LELNMTTERQ TKMVTGSDEI VPVPHPFNHN EKRTILAFAN 180
  181 DVKLQELAVE SGAEMALGQD TIKKIIKGQF RTDDYDFCVS HSDMGSSILP LRGILKMRFP 240
  241 TRANGGLGEN LPELIEKFKN GVKLNIKGDP VYPIWGLSDC VVGRLSMPNE HIEANIATVI 300
  301 AAACAHRNPA LGSFVNRALL MTIPGEENYA IDVKPWIPIP TEEEIEKIEK RKNKKKKKDE 360
  361 KKTEDTDDVA PVVAVAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] deduced N/A No confident structure predictions are available.
    2 View Details [93..377] PSI-BLAST 57.69897 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.262558979350187 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.51

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle