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Protein Overview: pnk-1

General Information:
Name(s) found: pnk-1 / CE30488 [WormBase]
Description(s) found:
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  • WBGene00004068 locus:pnk-1 status:Confirmed UniProt:H2KYP8 protein_id:CCD64182.1 [WormBase]
  • gi|25144312|ref|NP_740868.1| PaNtothenate Kinase family member (pnk-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|20198775|gb|AAM15553.1|U88170_7 Pantothenate kinase protein 1, isoform b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep79.fasta]
  • CE30488 WBGene00004068 locus:pnk-1 status:Confirmed TR:Q8T3C0 protein_id:AAM15553.1 [wormpep150.fasta]
  • 30488 WBGene00004068 locus:pnk-1 status:Confirmed TR:Q8T3C0 protein_id:AAM15553.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • PaNtothenate Kinase (pnk-1) [Caenorhabditis elegans]gi|20198775|gb|AAM15553.1| Pantothenate kinase protein 1, isoform b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:pnk-1 status:Confirmed TR:Q8T3C0 protein_id:AAM15553.1 [wormpep115.fasta.reversed]
  • CE30488 status:Confirmed protein_id:AAM15553.1 [wormpep80.hongbin]
  • CE30488 WBGene00004068 locus:pnk-1 status:Confirmed UniProt:Q8T3C0_CAEEL protein_id:AAM15553.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE30488 WBGene00004068 locus:pnk-1 status:Confirmed UniProt:Q8T3C0_CAEEL protein_id:AAM15553.1| [wormORF-contam.fasta]
  • Pantothenate kinase protein 1, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • PaNtothenate Kinase family member (pnk-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE30488 WBGene00004068 locus:pnk-1 status:Confirmed UniProt:Q8T3C0 protein_id:AAM15553.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE30488 WBGene00004068 locus:pnk-1 status:Confirmed UniProt:H2KYP8 protein_id:CCD64182.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of H2KYP7, PaNtothenate Kinase OS=Caenorhabditis elegans GN=pnk-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    coenzyme A biosynthetic process [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: ATP binding [IEALink to PubMed article]
    pantothenate kinase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHTSVTSSR RISPRGSPPN LRRTPPKIRK VLVLREKRAA ATEDQIMDDL LLSSKLKRVD  60
   61 SATGSVSPRV CAADALPTTT PAASTALRQT QKAPKTPYVI LPASDTFEKF RKTSRVSVDI 120
  121 GGTLIKVVYS SVMDEELPEE SLNGHTRKYA YEDGKRVLVN FKKFTDMDRF INFLKEVWTD 180
  181 RKRGDVIHCT GGGSYKYSEI IMKELGVRLQ RTDEMRSLIF GVNFLLSTNV DESFTYHHDA 240
  241 IGRNKFQYRP IAADLIYPFL LVNIGTGISI LKVDSPTSYE RVGGSSMGGG TFMGLGSLLT 300
  301 PAQNFDELLE MANRGDHRNV DKLVCDIYGG AYDELGLKAD LIAGSMAKCN RFEETTKKQQ 360
  361 HKPEDIAKSL LLMVSNNIGQ IFSDGIFVWH SV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] deduced N/A No confident structure predictions are available.
    2 View Details [107..392] PSI-BLAST 103.0 No description for 2i7nA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle