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Protein Overview: CE30374

General Information:
Name(s) found: CE30374 [WormBase]
Description(s) found:
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  • WBGene00018764 status:Confirmed UniProt:H2KZ59 protein_id:CCD66420.1 [WormBase]
  • gi|25141367|ref|NP_740834.1| hypothetical protein F53F10.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|20198830|gb|AAM15576.1|U97191_3 Hypothetical protein F53F10.2b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep79.fasta]
  • CE30374 WBGene00018764 status:Confirmed TR:Q8T3B3 protein_id:AAM15576.1 [wormpep150.fasta]
  • 30374 WBGene00018764 status:Confirmed TR:Q8T3B3 protein_id:AAM15576.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • ornithine decarboxylase (1E401) [Caenorhabditis elegans]gi|20198830|gb|AAM15576.1| Hypothetical protein F53F10.2b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Confirmed TR:Q8T3B3 protein_id:AAM15576.1 [wormpep115.fasta.reversed]
  • CE30374 status:Confirmed protein_id:AAM15576.1 [wormpep80.hongbin]
  • CE30374 WBGene00018764 status:Confirmed UniProt:Q8T3B3_CAEEL protein_id:AAM15576.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE30374 WBGene00018764 status:Confirmed UniProt:Q8T3B3_CAEEL protein_id:AAM15576.1| [wormORF-contam.fasta]
  • Hypothetical protein F53F10.2b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F53F10.2b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE30374 WBGene00018764 status:Confirmed UniProt:Q8T3B3 protein_id:AAM15576.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE30374 WBGene00018764 status:Confirmed UniProt:H2KZ59 protein_id:CCD66420.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 263 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lysine biosynthetic process via diaminopimelate [IEALink to PubMed article]
    Molecular Function: diaminopimelate decarboxylase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRHRLPSST YYTPAGEPEW SREMFGEQSI AVLSGAYRNP IEMARHVAAR CGSYQPFFVM  60
   61 DVAAIERRLE ALRVMLPRVR PNYAVACNAD PVLARVLSNN IDVNFEVSNT AELELVSMNV 120
  121 EPSRAVFCSQ LMTRKAIKNA VLAGCSTFVV ESEKQVTDVM NASPEAEIIL AVCLPYSTGE 180
  181 VPFGCSVDEI EEILDMAHLL GANVTGIYLE LGLRATLEDY ITSVHDARSI FETADQKFLT 240
  241 LRRVCFGNLS VPITILEKNA GKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..263] PSI-BLAST 49.522879 No description for 2oo0A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle