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Protein Overview: CE34394

General Information:
Name(s) found: CE34394 [WormBase]
Description(s) found:
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  • WBGene00022460 locus:use-1 Vesicle transport protein USE1 status:Confirmed UniProt:Q9N598 protein_id:CCD66202.1 [WormBase]
  • gi|71993285|ref|NP_491521.2| hypothetical protein Y110A7A.11 [Caenorhabditis elegans] [NCBI NR]
  • gi|68065391|sp|Q9N598.2|USE1_CAEEL RecName: Full=Vesicle transport protein USE1; AltName: Full=USE1-like protein [NCBI NR]
  • gi|31746561|gb|AAF60428.2| Hypothetical protein Y110A7A.11 [Caenorhabditis elegans] [NCBI NR]
  • Vesicle transport protein USE1 OS=Caenorhabditis elegans GN=Y110A7A.11 PE=3 SV=2 [Swiss-Prot]
  • [wormpep104.fasta]
  • Hypothetical protein Y110A7A.11 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE34394 WBGene00022460 status:Partially_confirmed SW:Q9N598 protein_id:AAF60428.2 [wormpep150.fasta]
  • 34394 WBGene00022460 status:Partially_confirmed TR:Q9N598 protein_id:AAF60428.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE34394 WBGene00022460 status:Partially_confirmed TR:Q9N598 protein_id:AAF60428.2 [wormpep132.fasta]
  • 34394 WBGene00022460 status:Partially_confirmed SW:Q9N598 protein_id:AAF60428.2 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Partially_confirmed TR:Q9N598 protein_id:AAF60428.2 [wormpep115.fasta.reversed]
  • CE34394 WBGene00022460 status:Confirmed UniProt:USE1_CAEEL protein_id:AAF60428.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE34394 WBGene00022460 status:Confirmed UniProt:USE1_CAEEL protein_id:AAF60428.2| [wormORF-contam.fasta]
  • Y110A7A.11 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Vesicle transport protein USE1 (USE1-like protein) [nr-271106-contam.fasta]
  • CE34394 WBGene00022460 status:Confirmed SW:Q9N598 protein_id:AAF60428.2 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE34394 WBGene00022460 status:Confirmed UniProt:Q9N598 protein_id:AAF60428.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE34394 WBGene00022460 locus:use-1 status:Confirmed UniProt:Q9N598 protein_id:CCD66202.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE34394 WBGene00022460 locus:use-1 status:Confirmed UniProt:Q9N598 protein_id:CCD66202.1 Vesicle transport protein USE1 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 254 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYISENELK FLRLLERTKR LTKEDMSANV WKVSAATKIL NKMIYTLQND ETTNDILHEY  60
   61 RQEVLQLKLL AEAESKSSAE ERLKVIEKIP RVFPDVQVTV ADSKNDNEAE SYDFEKESAA 120
  121 GLRATQRSIY RSDLRKQLLS SNKHRAQDTS EDQEFMKNEL VEEELANSLA TMARSFKTMM 180
  181 SAAGDVIKED TERAILMAKE VDDNKTALGI QSERVERHAY KCGYDCFKVM LIVLIFMSFV 240
  241 SMVLMMKIFK KAST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] MSA 3.119986 View MSA. No confident structure predictions are available.
    2 View Details [124..254] PSI-BLAST 3.522879 Synaptosomal-assosiated protein SNAP-25


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle