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Protein Overview: AMT12_ARATH

General Information:
Name(s) found: AMT12_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|5042414|gb|AAD38253.1|AC006193_9 Ammonium transporter ATM1;2 [Arabidopsis thaliana] [NCBI NR]
  • gi|4324714|gb|AAD17001.1| ammonium transporter [Arabidopsis thaliana] [NCBI NR]
  • pir||A96671 Ammonium transporter ATM1,2 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|22001525|sp|Q9ZPJ8.1|AMT12_ARATH RecName: Full=Ammonium transporter 1 member 2; Short=AtAMT1;2 [NCBI NR]
  • gi|20260052|gb|AAM13373.1| ammonium transporter ATM1;2 [Arabidopsis thaliana] [NCBI NR]
  • gi|17064990|gb|AAL32649.1| Ammonium transporter ATM1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15217741|ref|NP_176658.1| ATAMT1;2 (AMMONIUM TRANSPORTER 1;2); ammonium transmembrane transporter [Arabidopsis thaliana] [NCBI NR]
  • (Q9ZPJ8) Ammonium transporter 1, member 2 (AtAMT1;2) [Swiss-Prot]
  • Ammonium transporter 1 member 2 OS=Arabidopsis thaliana GN=AMT1-2 PE=1 SV=1 [Swiss-Prot]
  • ammonium transporter ATM1;2 [Arabidopsis thaliana]gi|4324714|gb|AAD17001.1| ammonium transporter [Arabidopsis thaliana]gi|5042414|gb|AAD38253.1| Ammonium transporter ATM1;2 [Arabidopsis thaliana]gi|17064990|gb|AAL32649.1| Ammonium transporter ATM1 [Ara [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ammonium transporter 1, member 2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATAMT1;2 | ATAMT1;2 (AMMONIUM TRANSPORTER 1;2); ammonium transmembrane transporter | chr1:24064684-24066228 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Ammonium transporter ATM1;2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ammonium transporter ATM1;2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATAMT1;2; ammonium transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Ammonium transporter 1 member 2 (AtAMT1;2) [nr-271106-contam.fasta]
  • ammonium transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Ammonium transporter ATM1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATAMT1;2, AMT1;2 | ammonium transporter 1;2 | chr1:24061021-24062565 REVERSE LENGTH=514 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 514 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    plasma membrane [IDA]
    Biological Process: ammonium transport [IMP]
    transport [ISS]
    response to nematode [IEP]
    methylammonium transport [IMP]
    Molecular Function: ammonium transmembrane transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTATTTCSA VDLSALLSSS SNSTSSLAAA TFLCSQISNI SNKLSDTTYA VDNTYLLFSA  60
   61 YLVFAMQLGF AMLCAGSVRA KNTMNIMLTN VLDAAAGAIS YYLFGFAFAF GTPSNGFIGR 120
  121 HHSFFALSSY PERPGSDFSF FLYQWAFAIA AAGITSGSIA ERTQFVAYLI YSTFLTGFVY 180
  181 PTVSHWFWSS DGWASASRSD NNLLFGSGAI DFAGSGVVHM VGGIAGLCGA LVEGPRIGRF 240
  241 DRSGRSVALR GHSASLVVLG TFLLWFGWYG FNPGSFLTIL KGYDKSRPYY GQWSAVGRTA 300
  301 VTTTLSGCTA ALTTLFSKRL LAGHWNVIDV CNGLLGGFAA ITSGCAVVEP WAAIVCGFVA 360
  361 SWVLIGFNLL AKKLKYDDPL EAAQLHGGCG AWGLIFTGLF ARKEYVNEIY SGDRPYGLFM 420
  421 GGGGKLLAAQ IVQIIVIVGW VTVTMGPLFY GLHKMNLLRI SAEDEMAGMD MTRHGGFAYA 480
  481 YNDEDDVSTK PWGHFAGRVE PTSRSSTPTP TLTV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..514] PSI-BLAST 95.0 The mechanism of ammonia transport based on the crystal structure of AmtB of E. coli.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ammonium transmembrane transporter activity
    		•  10.0624820335928 bayes_pls_golite062009
  • organic cation transmembrane transporter activity
    		•  9.07420898067257 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  7.57181833547312 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  7.46308808953548 bayes_pls_golite062009
  • methylammonium transmembrane transporter activity
    		•  7.38326654060024 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  7.08971867997216 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  7.03159982829686 bayes_pls_golite062009
  • transporter activity
    		•  5.3870893301235 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  5.3046132351753 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  5.16067985999244 bayes_pls_golite062009
  • high affinity secondary active ammonium transmembrane transporter activity
    		•  3.56825523857899 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  2.81164277777293 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.08017669832334 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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