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Protein Overview: RFL1_ARATH

General Information:
Name(s) found: RFL1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|46396936|sp|Q8L3R3.2|RFL1_ARATH RecName: Full=Disease resistance protein RFL1; AltName: Full=RPS5-like protein 1; AltName: Full=pNd13/pNd14 [NCBI NR]
  • gi|3309619|gb|AAC26125.1| NBS/LRR disease resistance protein [Arabidopsis thaliana] [NCBI NR]
  • pir||B86257 NBS/LRR disease resistance protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15221250|ref|NP_172685.1| RFL1 (RPS5-like 1); ATP binding / protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|10086513|gb|AAG12573.1|AC022522_6 NBS/LRR disease resistance protein [Arabidopsis thaliana] [NCBI NR]
  • Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1 PE=3 SV=2 [Swiss-Prot]
  • (Q8L3R3) Disease resistance protein RFL1 (RPS5-like protein 1) (pNd13/pNd14) [athaliana3702.FASTAC.txt]
  • Disease resistance protein RFL1 (RPS5-like protein 1) (pNd13/pNd14)gi|3309619|gb|AAC26125.1| NBS/LRR disease resistance protein [Arabidopsis thaliana]gi|15221250|ref|NP_172685.1| disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thali [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Disease resistance protein RFL1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RFL1 | RFL1 (RPS5-LIKE 1); ATP binding / protein binding | chr1:4140946-4143603 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • RFL1 (RPS5-LIKE 1); ATP binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Disease resistance protein RFL1 (RPS5-like protein 1) (pNd13/pNd14) [nr-271106-contam.fasta]
  • NBS/LRR disease resistance protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RFL1 | RPS5-like 1 | chr1:4140948-4143605 FORWARD LENGTH=885 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 885 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to bacterium [ISS]
    defense response [ISS]
    Molecular Function: ATP binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGCVSVSLS CDREVNQFSQ WLCVSGSYIQ NLSENLASLQ KAMGVLNAKR DDVQGRINRE  60
   61 EFTGHRRRLA QVQVWLTRIQ TIENQFNDLL STCNAEIQRL CLCGFCSKNV KMSYLYGKRV 120
  121 IVLLREVEGL SSQGVFDIVT EAAPIAEVEE LPIQSTIVGQ DSMLDKVWNC LMEDKVWIVG 180
  181 LYGMGGVGKT TLLTQINNKF SKLGGGFDVV IWVVVSKNAT VHKIQKSIGE KLGLVGKNWD 240
  241 EKNKNQRALD IHNVLRRKKF VLLLDDIWEK VELKVIGVPY PSGENGCKVA FTTHSKEVCG 300
  301 RMGVDNPMEI SCLDTGNAWD LLKKKVGENT LGSHPDIPQL ARKVSEKCCG LPLALNVIGE 360
  361 TMSFKRTIQE WRHATEVLTS ATDFSGMEDE ILPILKYSYD SLNGEDAKSC FLYCSLFPED 420
  421 FEIRKEMLIE YWICEGFIKE KQGREKAFNQ GYDILGTLVR SSLLLEGAKD KDVVSMHDMV 480
  481 REMALWIFSD LGKHKERCIV QAGIGLDELP EVENWRAVKR MSLMNNNFEK ILGSPECVEL 540
  541 ITLFLQNNYK LVDISMEFFR CMPSLAVLDL SENHSLSELP EEISELVSLQ YLDLSGTYIE 600
  601 RLPHGLHELR KLVHLKLERT RRLESISGIS YLSSLRTLRL RDSKTTLDTG LMKELQLLEH 660
  661 LELITTDISS GLVGELFCYP RVGRCIQHIY IRDHWERPEE SVGVLVLPAI HNLCYISIWN 720
  721 CWMWEIMIEK TPWKKNLTNP NFSNLSNVRI EGCDGLKDLT WLLFAPNLIN LRVWGCKHLE 780
  781 DIISKEKAAS VLEKEILPFQ KLECLNLYQL SELKSIYWNA LPFQRLRCLD ILNNCPKLRK 840
  841 LPLDSKSVVK VEEFVIKYKE KKWIERVEWE DEATQYRFLP TCRLR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..302] PSI-BLAST 4.39794 Crystal Structure Analysis of ClpB
    2 View Details [303..385] PSI-BLAST 6.154902 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [386..885] PSI-BLAST 14.522879 No description for 2z63A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle