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Protein Overview: RL72_ARATH

General Information:
Name(s) found: RL72_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|4262232|gb|AAD14525.1| putative ribosomal protein L7 [Arabidopsis thaliana] [NCBI NR]
  • gi|38503417|sp|P60040.1|RL72_ARATH RecName: Full=60S ribosomal protein L7-2 [NCBI NR]
  • pir||D84422 60S ribosomal protein L7 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21537351|gb|AAM61692.1| putative ribosomal protein L7 [Arabidopsis thaliana] [NCBI NR]
  • gi|20148739|gb|AAM10260.1| 60S ribosomal protein L7 [Arabidopsis thaliana] [NCBI NR]
  • gi|19310657|gb|AAL85059.1| putative ribosomal protein L7 [Arabidopsis thaliana] [NCBI NR]
  • gi|15226212|ref|NP_178234.1| 60S ribosomal protein L7 (RPL7B) [Arabidopsis thaliana] [NCBI NR]
  • gi|15028383|gb|AAK76668.1| putative ribosomal protein L7 [Arabidopsis thaliana] [NCBI NR]
  • gi|13877567|gb|AAK43861.1|AF370484_1 60S ribosomal protein L7 [Arabidopsis thaliana] [NCBI NR]
  • 60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=2 SV=1 [Swiss-Prot]
  • (P60040) 60S ribosomal protein L7-1 [Swiss-Prot]
  • putative ribosomal protein L7 [Arabidopsis thaliana]gi|19310657|gb|AAL85059.1| putative ribosomal protein L7 [Arabidopsis thaliana]gi|15028383|gb|AAK76668.1| putative ribosomal protein L7 [Arabidopsis thaliana]gi|4262232|gb|AAD14525.1| putative ribosom [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 60S ribosomal protein L7-1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 60S ribosomal protein L7 (RPL7B) | chr2:132942-134263 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative ribosomal protein L7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • structural constituent of ribosome / transcription regulator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein L7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein L7-2 [nr-271106-contam.fasta]
  • | Symbols: | Ribosomal protein L30/L7 family protein | chr2:132943-134264 REVERSE LENGTH=242 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 242 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    cytosolic ribosome [IDA]
    cell wall [IDA]
    membrane [IDA]
    large ribosomal subunit [ISS]
    cytosolic large ribosomal subunit [IDA]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]
    transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVESKVVVPE SVLKKRKREE EWALEKKQNV EAAKKKNAEN RKLIFKRAEQ YSKEYAEKEK  60
   61 ELISLKREAK LKGGFYVDPE AKLLFIIRIR GINAIDPKTK KILQLLRLRQ IFNGVFLKVN 120
  121 KATMNMLRRV EPYVTYGFPN LKSVKELIYK RGYGKLNHQR IALTDNSIVE QALGKHGIIC 180
  181 TEDLIHEILT VGPHFKEANN FLWPFQLKAP LGGLKKKRNH YVEGGDAGNR ENFINELIRR 240
  241 MN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] Pfam 30.823909 No description for PF08079.3 was found. Confident ab initio structure predictions are available.
    2 View Details [79..242] PSI-BLAST 60.30103 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle