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Protein Overview: RL73_ARATH

General Information:
Name(s) found: RL73_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|38503416|sp|P60039.1|RL73_ARATH RecName: Full=60S ribosomal protein L7-3 [NCBI NR]
  • gi|30689617|ref|NP_850410.1| 60S ribosomal protein L7 (RPL7C) [Arabidopsis thaliana] [NCBI NR]
  • gi|21593176|gb|AAM65125.1| 60S ribosomal protein L7 [Arabidopsis thaliana] [NCBI NR]
  • gi|20148291|gb|AAM10036.1| 60S ribosomal protein L7 [Arabidopsis thaliana] [NCBI NR]
  • gi|17473920|gb|AAL38372.1| 60S ribosomal protein L7 [Arabidopsis thaliana] [NCBI NR]
  • gi|17386142|gb|AAL38617.1|AF446884_1 At2g44120/F6E13.25 [Arabidopsis thaliana] [NCBI NR]
  • gi|15450713|gb|AAK96628.1| At2g44120/F6E13.25 [Arabidopsis thaliana] [NCBI NR]
  • 60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1 [Swiss-Prot]
  • (P60039) 60S ribosomal protein L7-2 [Swiss-Prot]
  • 60S ribosomal protein L7 [Arabidopsis thaliana]gi|20148291|gb|AAM10036.1| 60S ribosomal protein L7 [Arabidopsis thaliana]gi|17473920|gb|AAL38372.1| 60S ribosomal protein L7 [Arabidopsis thaliana]gi|17386142|gb|AAL38617.1| At2g44120/F6E13.25 [Arabidopsi [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 60S ribosomal protein L7-2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 60S ribosomal protein L7 (RPL7C) | chr2:18256303-18257478 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At2g44120/F6E13.25 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein L7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein L7-3 [nr-271106-contam.fasta]
  • structural constituent of ribosome / transcription regulator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ribosomal protein L30/L7 family protein | chr2:18249227-18250402 REVERSE LENGTH=242 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 242 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    cytosolic ribosome [IDA]
    membrane [IDA]
    large ribosomal subunit [ISS]
    cytosolic large ribosomal subunit [IDA]
    nucleolus [IDA]
    vacuole [IDA]
    Biological Process: translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]
    transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESKVVVPE SVLKKIKRQE EWALAKKDEA VAAKKKSVEA RKLIFKRAEQ YAKEYAEKDN  60
   61 ELIRLKREAK LKGGFYVDPE AKLLFIIRIR GINAIDPKTK KILQLLRLRQ IFNGVFLKVN 120
  121 KATVNMLRRV EPYVTYGYPN LKSVKELIYK RGYGKLNHQR IALTDNSIVD QALGKHGIIC 180
  181 VEDLIHEIMT VGPHFKEANN FLWPFQLKAP LGGLKKKRNH YVEGGDAGNR ENFINELVRR 240
  241 MN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] Pfam 31.09691 No description for PF08079.3 was found. Confident ab initio structure predictions are available.
    2 View Details [79..242] PSI-BLAST 60.39794 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle