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Protein Overview: RL74_ARATH

General Information:
Name(s) found: RL74_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|42572419|ref|NP_974305.1| 60S ribosomal protein L7 (RPL7D) [Arabidopsis thaliana] [NCBI NR]
  • gi|42572417|ref|NP_974304.1| 60S ribosomal protein L7 (RPL7D) [Arabidopsis thaliana] [NCBI NR]
  • gi|38503370|sp|Q9LHP1.1|RL74_ARATH RecName: Full=60S ribosomal protein L7-4 [NCBI NR]
  • gi|18655395|gb|AAL76153.1| AT3g13580/K20M4_2 [Arabidopsis thaliana] [NCBI NR]
  • gi|15810196|gb|AAL06999.1| AT3g13580/K20M4_2 [Arabidopsis thaliana] [NCBI NR]
  • gi|15231288|ref|NP_187967.1| 60S ribosomal protein L7 (RPL7D) [Arabidopsis thaliana] [NCBI NR]
  • gi|14532552|gb|AAK64004.1| AT3g13580/K20M4_2 [Arabidopsis thaliana] [NCBI NR]
  • gi|11994560|dbj|BAB02600.1| 60S ribosomal protein L7 [Arabidopsis thaliana] [NCBI NR]
  • 60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1 [Swiss-Prot]
  • (Q9LHP1) 60S ribosomal protein L7-3 [Swiss-Prot]
  • 60S ribosomal protein L7 [Arabidopsis thaliana]gi|18655395|gb|AAL76153.1| AT3g13580/K20M4_2 [Arabidopsis thaliana]gi|15810196|gb|AAL06999.1| AT3g13580/K20M4_2 [Arabidopsis thaliana]gi|14532552|gb|AAK64004.1| AT3g13580/K20M4_2 [Arabidopsis thaliana]gi| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 60S ribosomal protein L7-3 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 60S ribosomal protein L7 (RPL7D) | chr3:4433816-4435116 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT3g13580/K20M4_2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein L7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein L7-4 [nr-271106-contam.fasta]
  • structural constituent of ribosome / transcription regulator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ribosomal protein L30/L7 family protein | chr3:4433809-4435109 FORWARD LENGTH=244 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    cytosolic ribosome [IDA]
    membrane [IDA]
    large ribosomal subunit [ISS]
    cytosolic large ribosomal subunit [IDA]
    Biological Process: translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]
    transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEAESKTVV PESVLKKRKR EEEWALAKKQ ELEAAKKQNA EKRKLIFNRA KQYSKEYQEK  60
   61 ERELIQLKRE AKLKGGFYVD PEAKLLFIIR IRGINAIDPK TKKILQLLRL RQIFNGVFLK 120
  121 VNKATINMLR RVEPYVTYGY PNLKSVKELI YKRGFGKLNH QRTALTDNSI VDQGLGKHGI 180
  181 ICVEDLIHEI MTVGPHFKEA NNFLWPFQLK APLGGMKKKR NHYVEGGDAG NRENFINELV 240
  241 RRMN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] Pfam 31.721246 No description for PF08079.3 was found. No confident structure predictions are available.
    2 View Details [81..244] PSI-BLAST 61.39794 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle