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Protein Overview: gi|110737719, gi...

General Information:
Name(s) found: gi|9759432 [NCBI NR]
gi|297381 [NCBI NR]
gi|15237975 [NCBI NR]
gi|110737719 [NCBI NR]
Description(s) found:
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  • gi|9759432|dbj|BAB10229.1| extA [Arabidopsis thaliana] [NCBI NR]
  • gi|297381|emb|CAA47807.1| extA [Arabidopsis thaliana] [NCBI NR]
  • gi|15237975|ref|NP_199501.1| protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110737719|dbj|BAF00798.1| extA [Arabidopsis thaliana] [NCBI NR]
  • (Q39100) EXTA protein [athaliana3702.FASTAC.txt]
  • extA [Arabidopsis thaliana]gi|297381|emb|CAA47807.1| extA [Arabidopsis thaliana]gi|15237975|ref|NP_199501.1| protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | chr5:19057181-19057564 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • extA [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • lipid binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:19039954-19040337 REVERSE LENGTH=127 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein OS=Arabidopsis thaliana GN=extA PE=2 SV=1 [ARATH-contam.fasta]
  • Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein OS=Arabidopsis thaliana GN=extA PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 127 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: lipid transport [IEA][ISS]
    Molecular Function: lipid binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYSKIALLL IFNVIFFTLV SSTSVPCPPP PPKSHHKKPA TPSPKPTCKD ALKLKVCANV  60
   61 LDLVKVSLPP TSNCCALIKG LVDLEAAVCL CTALKANVLG INLNVPISLN VVLNHCGKKV 120
  121 PSGFKCA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] PSI-BLAST 10.09691 CRYSTAL STRUCTURE OF HYDROPHOBIC PROTEIN FROM SOYBEAN; A MEMBER OF A NEW CYSTINE-RICH FAMILY


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle