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Protein Overview: gi|18402759, gi|...

General Information:
Name(s) found: gi|9294408 [NCBI NR]
gi|21536708 [NCBI NR]
gi|18402759 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|9294408|dbj|BAB02489.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|21536708|gb|AAM61040.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|18402759|ref|NP_566667.1| transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 418 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGATTASSG DHNNLRLPTP TLDAESQTLL QSISAEGGYA YARMAVLAVA GDQSAAEAAR  60
   61 DMAWEQLHSG PWHSVLPVWR DAYSMACLHV AKIHFAAGEF GEALGALDMG LIMGGMLLRK 120
  121 DLHDSVLLVS SEARKMTKSL EEASGDFKGE RLVPEVPVDV NEVLKILPCR SLTCKRVEKR 180
  181 SGLSLEGFLR DYYLPGTPVV ITNSMAHWPA RTKWNHLDYL NAVAGNRTVP VEVGKNYLCS 240
  241 DWKQELVTFS KFLERMRTNK SSPMEPTYLA QHPLFDQINE LRDDICIPDY CFVGGGELQS 300
  301 LNAWFGPAGT VTPLHHDPHH NILAQVVGKK YIRLYPSFLQ DELYPYSETM LCNSSQVDLD 360
  361 NIDETEFPKA MELEFMDCIL EEGEMLYIPP KWWHYVRSLT MSLSVSFWWS NEAESSSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] MSA 2.116986 View MSA. No confident structure predictions are available.
    2 View Details [156..418] PSI-BLAST 43.522879 Hypoxia-inducible factor HIF ihhibitor (FIH1)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.154892236593256 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle