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Protein Overview: AOP1C_ARATH

General Information:
Name(s) found: AOP1C_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Probable 2-oxoglutarate-dependent dioxygenase AOP1 OS=Arabidopsis thaliana GN=AOP1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 322 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    Biological Process: glucosinolate biosynthetic process [ISS]
    Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSDFVPPSV SFQLPVIDFS DQNLKPGSSK WDEVTADVLK ALEDYGCFEA SFDKLSVELN  60
   61 RSVFEAMEDL FELPIPTKQR NVSSKPFHGY LCHNLYESLG INDANVLEKV NDFTQQLWPD 120
  121 HGNKSISETI HLFSEQLVEL DLMVRRMIME SFGIENYIDE HLNSTYYLTR LMKYTSPPDD 180
  181 DDDDDEETKL GLRSHTDKNI ITILHQYQVD GLEVKTKDDK WIKVKPSQDS VLVMVGDSLC 240
  241 ALLNGRLHSP YHRVIMTGKK TRYSTGLFSI PKTGVIIDSP EELVDKEHPR IFKPFEYTDF 300
  301 LHFFQTEAGR IAQSALHAFA AF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..322] PSI-BLAST 87.39794 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.921320409505 bayes_pls_golite062009
  • binding
    		•  0.588242505102319 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0678642854814351 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle