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Protein Overview: BH032_ARATH

General Information:
Name(s) found: BH032_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7939557|dbj|BAA95758.1| DNA-binding protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|76589372|gb|ABA54263.1| ABA-regulated protein AIG1 [Arabidopsis thaliana] [NCBI NR]
  • gi|75311510|sp|Q9LS08.1|BH032_ARATH RecName: Full=Transcription factor AIG1; Short=AtAIG1; AltName: Full=Transcription factor EN 54; AltName: Full=bHLH transcription factor bHLH032; AltName: Full=Basic helix-loop-helix protein 32; Short=bHLH 32; Short=Atb [NCBI NR]
  • gi|21592500|gb|AAM64450.1| putative HLH DNA-binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18958020|gb|AAL79583.1| AT3g25710/K13N2_1 [Arabidopsis thaliana] [NCBI NR]
  • gi|16604444|gb|AAL24228.1| AT3g25710/K13N2_1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15230869|ref|NP_189199.1| BHLH32 (BASIC HELIX-LOOP-HELIX 32); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1 [Swiss-Prot]
  • (Q9LS08) Putative HLH DNA-binding protein (AT3g25710/K13N2_1) [athaliana3702.FASTAC.txt]
  • putative HLH DNA-binding protein [Arabidopsis thaliana]gi|7939557|dbj|BAA95758.1| DNA-binding protein-like [Arabidopsis thaliana]gi|18958020|gb|AAL79583.1| AT3g25710/K13N2_1 [Arabidopsis thaliana]gi|16604444|gb|AAL24228.1| AT3g25710/K13N2_1 [Arabidopsi [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Basic helix-loop-helix (bHLH) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | basic helix-loop-helix (bHLH) family protein | chr3:9370835-9372333 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ABA-regulated protein AIG1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA-binding protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT3g25710/K13N2_1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative HLH DNA-binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: BHLH32, ATAIG1, TMO5 | basic helix-loop-helix 32 | chr3:9369598-9371096 FORWARD LENGTH=344 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 344 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: root development [IEP]
    regulation of transcription [TAS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYAMKEEDCL QTFHNLQDYQ DQFHLHHHPQ ILPWSSTSLP SFDPLHFPSN PTRYSDPVHY  60
   61 FNRRASSSSS SFDYNDGFVS PPPSMDHPQN HLRILSEALG PIMRRGSSFG FDGEIMGKLS 120
  121 AQEVMDAKAL AASKSHSEAE RRRRERINTH LAKLRSILPN TTKTDKASLL AEVIQHMKEL 180
  181 KRQTSQITDT YQVPTECDDL TVDSSYNDEE GNLVIRASFC CQDRTDLMHD VINALKSLRL 240
  241 RTLKAEIATV GGRVKNILFL SREYDDEEDH DSYRRNFDGD DVEDYDEERM MNNRVSSIEE 300
  301 ALKAVIEKCV HNNDESNDNN NLEKSSSGGI KRQRTSKMVN RCYN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] deduced N/A No confident structure predictions are available.
    2 View Details [115..210] PSI-BLAST 12.69897 Myc prot-oncogene protein
    3 View Details [211..344] FFAS03 1.77 No description for 2nyiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.12507195426228 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.43204604575196 bayes_pls_golite062009
  • DNA binding
    		•  0.40884226851256 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.31759335140578 bayes_pls_golite062009
  • transcription factor activity
    		•  0.09721565916723 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle