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Protein Overview: gi|4337175, gi|1...

General Information:
Name(s) found: gi|4337175 [NCBI NR]
gi|25402533 [NCBI NR]
gi|21536763 [NCBI NR]
gi|19310813 [NCBI NR]
gi|18391006 [NCBI NR]
gi|15028183 [NCBI NR]
gi|13194796 [NCBI NR]
Description(s) found:
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  • gi|4337175|gb|AAD18096.1| ESTs gb|T20589, gb|T04648, gb|AA597906, gb|T04111, gb|R84180, gb|R65428, gb|T44439, gb|T76570, gb|R90004, gb|T45020, gb|T42457, gb|T20921, gb|AA042762 and gb|AA720210 come from this gene. [Arabidopsis thaliana] [NCBI NR]
  • pir||B86226 hypothetical protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21536763|gb|AAM61095.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|19310813|gb|AAL85137.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18391006|ref|NP_563841.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15028183|gb|AAK76588.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13194796|gb|AAK15560.1|AF348589_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9ZPZ4) Hypothetical protein T31J12.3 [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|19310813|gb|AAL85137.1| unknown protein [Arabidopsis thaliana]gi|15028183|gb|AAK76588.1| unknown protein [Arabidopsis thaliana]gi|21536763|gb|AAM61095.1| unknown [Arabidopsis thaliana]gi|4337175|gb|AAD18096.1| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56580.1); similar to unknown [Populus trichocarpa] (GB:ABK94207.1); contains InterPro domain Protein of unknown function DUF538 (InterPro:IPR007493) | chr1:3009111-3009650 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ESTs gb|T20589, gb|T04648, gb|AA597906, gb|T04111, gb|R84180, gb|R65428, gb|T44439, gb|T76570, gb|R90004, gb|T45020, gb|T42457, gb|T20921, gb|AA042762 and gb|AA720210 come from this gene. [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Protein of unknown function, DUF538 | chr1:3009109-3009648 FORWARD LENGTH=179 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein At1g09310 OS=Arabidopsis thaliana GN=T31J12.3 PE=2 SV=1 [ARATH-contam.fasta]
  • Putative uncharacterized protein At1g09310 OS=Arabidopsis thaliana GN=T31J12.3 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 179 amino acids

    Gene Ontology:
    Cellular Component: apoplast [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLVTEEVRA KAEMYTGDEI CREKTKCFLK EISMPNGLLP LKDIEEVGYD RESGVVWLKQ  60
   61 KKSITHKFTE IDKLVSYGTE VTAIVETGKI KKLTGVKAKE LLIWVTINEI YTEEPPTKIT 120
  121 FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..179] PSI-BLAST 28.0 Solution NMR structure of At5g01610, an Arabidopsis thaliana protein containing DUF538 domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle