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Protein Overview: CHI62_ARATH

General Information:
Name(s) found: CHI62_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||D84868 probable endochitinase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|2281108|gb|AAB64044.1| putative endochitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|15224321|ref|NP_181890.1| chitinase, putative [Arabidopsis thaliana] [NCBI NR]
  • Endochitinase At2g43620 OS=Arabidopsis thaliana GN=At2g43620 PE=3 SV=1 [Swiss-Prot]
  • (O22841) Putative endochitinase [athaliana3702.FASTAC.txt]
  • putative endochitinase [Arabidopsis thaliana]gi|15224321|ref|NP_181890.1| chitinase, putative [Arabidopsis thaliana]gi|25289346|pir||D84868 probable endochitinase [imported] - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Chitinase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | chitinase, putative | chr2:18101031-18102102 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • chitin binding / chitinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative endochitinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Chitinase family protein | chr2:18093954-18095025 REVERSE LENGTH=283 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Chitinase-like protein OS=Arabidopsis thaliana GN=At2g43620 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: apoplast [IDA]
    Biological Process: NONE FOUND
    Molecular Function: chitinase activity [IEA][ISS]
    chitin binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLRAMLKN AFILFLFTLT IMAKTVFSQQ CGTTGCAANL CCSRYGYCGT TDAYCGTGCR  60
   61 SGPCSSSTTP IPPTPSGGAG GLNADPRDTI ENVVTPAFFD GIMSKVGNGC PAKGFYTRQA 120
  121 FIAAAQSFDA YKGTVAKREI AAMLAQFSHE SGSFCYKEEI ARGKYCSPST AYPCTPGKDY 180
  181 YGRGPIQITW NYNYGAAGKF LGLPLLTDPD MVARSPQVAF QCAMWFWNLN VRPVLDQGFG 240
  241 ATTRKINGGE CNGRRPAAVQ SRVNYYLEFC RTLGITPGAN LSC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] PSI-BLAST 63.522879 No description for 2dkvA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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