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Protein Overview: gi|15242954, gi|...

General Information:
Name(s) found: gi|9759538 [NCBI NR]
gi|15242954 [NCBI NR]
Description(s) found:
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  • gi|9759538|dbj|BAB11004.1| disease resistance protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|15242954|ref|NP_200620.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9FGT2) Disease resistance protein-like [athaliana3702.FASTAC.txt]
  • disease resistance protein-like [Arabidopsis thaliana]gi|15242954|ref|NP_200620.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Disease resistance protein (TIR-NBS-LRR class) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:23534718-23538153 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • disease resistance protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:23517492-23520927 FORWARD LENGTH=1046 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Disease resistance protein-like OS=Arabidopsis thaliana GN=At5g58120 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1046 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    protein binding [IEA]
    transmembrane receptor activity [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSSSRS RTWRYRVFTN FHGPDVRKTF LSHLRKQFSY NGISMFNDQS IERSQTIVPA  60
   61 LTGAIKESRI SIVVLSKNYA SSRWCLDELL EILKCREDIG QIVMTVFYGV DPSDVRKQTG 120
  121 EFGIAFNKTC EGKTNEETQK WSKALNDVGN IAGEHFFNWD NEAKMIEKIA RDVSNKLNAT 180
  181 ISWDFEDMVG IEAHLQKMQS LLHLDYEDGA MIVGIYGPAG IGKTTIARAL HSRLSSSFQL 240
  241 TCFMENIRGS YNSGLDEYGL KLRLQEQLLS KVLNHDGIRI NHLGAIPERL CDQKVLIILD 300
  301 DVDDLQQLEA LANETNWFGP GSRIIVTTED QELLEQHDVN KKYHVDFPTR EEACKIFCTY 360
  361 AFRRSFAPYG FEKLAERVTW LCSNLPLGLR VMGSTLRGKK EDDWEGILRR LENSLDRKID 420
  421 GVLRVGYDHL CEDDQFLYLL IAFFFNYVDD DHVKAMLVED NLDVKLGLKT LAYKSLIQIS 480
  481 AEGNIVMHKL LQRVGREAIQ RQEPTKRRIL IDAREICDVL RYGKGTSNVS GISFDTSDMS 540
  541 EVTISDDAFK RLHDLRFLKV TKSRYDGKYR MHIPAGIEFP CLLRLLHWEA YPSKCLPPTF 600
  601 NPEFLVELNM QGSQLEHLWS GTQSLRNLKN MDLGWSPNLK ELPDLTNATN LEDLNLNSCE 660
  661 SLVEIPSSFS HLHKLKNLWM SYCINLQVIP AHMNLVSLER VTMTGCSRFR KIPVISTHIN 720
  721 YLDIAHNTEF EVVHASIALW CRLHYLNMSY NENFMGLTHL PMSLTQLILR YSDIERIPDC 780
  781 IKALHQLFSL DLTGCRRLAS LPELPGSLLD LEAEDCESLE TVFSPLHTPR ALLNFTNCFK 840
  841 LGGQARRAII RRRSEIIGKA LLPGREVPAE FDHRAKGNSL TIILNGYRPS YDFIQYLVCV 900
  901 VISPNQEITK ISDSSTLLCH TNGYIFPSYE EVYIGAVSKC RKEHLFIFRS GYYLNVDPSG 960
  961 ASREIVFEFS SKSQDFDIIE CGVKIWTAQS IERGYLVFED DNEIKHDDHT NRVRGHYKAS1020
 1021 NVDYKSVSRK RPRKTDLKLE IPRRRF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] Pfam 54.259637 No description for PF01582.12 was found. No confident structure predictions are available.
    2 View Details [160..481] PSI-BLAST 11.522879 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [482..1046] PSI-BLAST 14.154902 No description for 3cigA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle