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Protein Overview: gi|5882739, gi|4...

General Information:
Name(s) found: gi|5882739 [NCBI NR]
gi|41618916 [NCBI NR]
gi|25406386 [NCBI NR]
gi|20465857 [NCBI NR]
gi|17979193 [NCBI NR]
gi|15221408 [NCBI NR]
gi|12323911 [NCBI NR]
Description(s) found:
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  • gi|5882739|gb|AAD55292.1|AC008263_23 Contains PF|00249 Myb-like DNA-binding domain. EST gb|Z18152 comes from this gene. [Arabidopsis thaliana] [NCBI NR]
  • gi|41618916|gb|AAS09980.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||H96777 hypothetical protein F9E10.31 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20465857|gb|AAM20033.1| putative myb-related transcription activator [Arabidopsis thaliana] [NCBI NR]
  • gi|17979193|gb|AAL49835.1| putative myb-related transcription activator protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15221408|ref|NP_177622.1| myb family transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|12323911|gb|AAG51937.1|AC013258_31 putative MYB family transcription factor; 86049-87165 [Arabidopsis thaliana] [NCBI NR]
  • (Q9S7N6) Putative MYB family transcription factor (Putative myb-related transcription activator) [athaliana3702.FASTAC.txt]
  • putative myb-related transcription activator [Arabidopsis thaliana]gi|17979193|gb|AAL49835.1| putative myb-related transcription activator protein [Arabidopsis thaliana]gi|5882739|gb|AAD55292.1| Contains PF|00249 Myb-like DNA-binding domain. EST gb|Z18 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Myb family transcription factor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | myb family transcription factor | chr1:28119862-28120978 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • MYB transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative myb-related transcription activator protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative MYB family transcription factor; 86049-87165 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Contains PF|00249 Myb-like DNA-binding domain. EST gb|Z18152 comes from this gene. [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative myb-related transcription activator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Homeodomain-like superfamily protein | chr1:28116201-28117317 REVERSE LENGTH=265 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • F25A4.19 protein OS=Arabidopsis thaliana GN=F9E10.31 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 265 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: response to gibberellin stimulus [IEP]
    response to abscisic acid stimulus [IEP]
    response to salt stress [IEP]
    regulation of transcription, DNA-dependent [ISS]
    response to jasmonic acid stimulus [IEP]
    response to cadmium ion [IEP]
    response to salicylic acid stimulus [IEP]
    response to ethylene stimulus [IEP]
    response to auxin stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGSTSSSE STTACAGSGT RREIMLFGVR VVLDPMRKCV SLNNLSDYEQ TAETPKIDGE  60
   61 DRDEQDMNKT PAGYASADEA LPMSSSNGKI ERKRGVPWTE EEHKLFLLGL QRVGKGDWKG 120
  121 ISRNFVKTRT STQVASHAQK YFLRRSNLNR RRRRSSLFDM TTDTVIPMEE DHQVLIQENT 180
  181 SQSSSPVPEI NNFSIHPVMQ VFPEFPVPTG NQSYGQLTSS NLINLVPLTF QSSPAPLSLN 240
  241 LSLASSNLNE PSPSMHPAFN TIGVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..265] PSI-BLAST 15.522879 No description for 2v1dB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle