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Protein Overview: GGPPA_ARATH

General Information:
Name(s) found: GGPPA_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP synthetase/farnesyltranstransferase [Arabidopsis thaliana] [NCBI NR]
  • gi|15231055|ref|NP_188651.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] [NCBI NR]
  • Geranylgeranyl pyrophosphate synthase 10, mitochondrial OS=Arabidopsis thaliana GN=At3g20160 PE=1 SV=1 [Swiss-Prot]
  • (Q9LJY2) Geranyl geranyl pyrophosphate synthase [athaliana3702.FASTAC.txt]
  • geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]gi|15231055|ref|NP_188651.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Geranylgeranyl pyrophosphate synthase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative | chr3:7039001-7040035 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • geranylgeranyl pyrophosphate synthase/GGPP synthetase/farnesyltranstransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • farnesyltranstransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Terpenoid synthases superfamily protein | chr3:7038995-7040029 FORWARD LENGTH=344 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Geranylgeranyl pyrophosphate synthase 10, mitochondrial OS=Arabidopsis thaliana GN=At3g20160 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 344 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: isoprenoid biosynthetic process [IEA][ISS]
    Molecular Function: farnesyltranstransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENREVFVYI VISIFRSLQF LFWRFRPRYN DVTSALTRPL TSAASYDFKF MSYMVNKAKS  60
   61 VNKALEEAVP LREPELKIRE AMRYTLLSDG KRVRPMLCLA ACELVGGQES TAMSAACAIE 120
  121 MLHASSLILD DLPCMDNDSL RRGKPTNHIV FGESIAILAS QALIALAVQK TTSSTFADVP 180
  181 PERILKTVQE MVKAVEGLVA GQQADLAGEG MRFDSDTGLE HLEFIHIHKT AALLEAAAVM 240
  241 GAIMGGGSDE EIERLRSYAR CIGLMFQVVD DVLDVTKSSE ELGKTAGKDL IAGKLTYPRL 300
  301 MGVEKSKEYA ERLNIEAREH LLGFDIDKVA PLVSLADYIV NRQN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..344] PSI-BLAST 76.39794 No description for 2j1pA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.48

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle