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Protein Overview: PME62_ARATH

General Information:
Name(s) found: PME62_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9758593|dbj|BAB09226.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|75171621|sp|Q9FM79.1|PME62_ARATH RecName: Full=Pectinesterase QRT1; Short=PE QRT1; Short=AtQRT1; AltName: Full=Protein QUARTET 1; AltName: Full=Pectin methylesterase QRT1; AltName: Full=Pectin methylesterase 62; Short=AtPME62; Flags: Precursor [NCBI NR]
  • gi|15240544|ref|NP_200370.1| QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] [NCBI NR]
  • gi|115490609|gb|ABI97858.1| quartet1 [Arabidopsis thaliana] [NCBI NR]
  • Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1 [Swiss-Prot]
  • (Q9FM79) Similarity to pectin methylesterase [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15240544|ref|NP_200370.1| pectinesterase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pectinesterase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: QRT1 | QRT1 (QUARTET 1); pectinesterase | chr5:22537137-22538925 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • pectinesterase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • quartet1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: QRT1 | Pectin lyase-like superfamily protein | chr5:22519911-22521699 FORWARD LENGTH=380 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 380 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IEA]
    endomembrane system [IEA]
    plant-type cell wall [ISS]
    Biological Process: pectin catabolic process [IMP]
    Molecular Function: pectinesterase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVEAFIPAV LLLCFGVMLC LKSSCALQIG NNNELKNYIS WEDLRVVEDG RIERSFSIKE  60
   61 NSNWVTTNAN ANANATNVRR VIVVDKNGGG DSVTVQGAVD MVPDSNSQRV KIFILPGIYR 120
  121 EKVIVPKSKP YISFIGNESY AGDTVISWSD KASDLGCDGK ELGTYRTASV SIESDFFCAT 180
  181 AITFENTVVA EAGEQGRQAV ALRIIGDKAV FYRVRVLGSQ DTLFDDNGSH YFYQCYIQGN 240
  241 VDFIFGNAKS LYQDCDIHST AKRYGAIAAH HRDSETEDTG FSFVNCDISG TGQIYLGRAW 300
  301 GNYSRTVYSN CFIADIITPV GWSDWKHPER QRKVMFGEYN CRGRGAERGG RVPWSKTLTR 360
  361 DEVKPFLGRE FIYGDQWLRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..380] PSI-BLAST 83.522879 Crystal structure of the complex between pectin methylesterase and its inhibitor protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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