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Protein Overview: gi|15242310, gi|...

General Information:
Name(s) found: gi|9759349 [NCBI NR]
gi|15242310 [NCBI NR]
gi|117413996 [NCBI NR]
Description(s) found:
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  • gi|9759349|dbj|BAB10004.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15242310|ref|NP_196472.1| ILP1 (increased level of polyploidy1-1D); translation repressor [Arabidopsis thaliana] [NCBI NR]
  • gi|117413996|dbj|BAF36503.1| transcriptional repressor ILP1 [Arabidopsis thaliana] [NCBI NR]
  • (Q9FNN3) Similarity to unknown protein [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15242310|ref|NP_196472.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ILP1 | ILP1 (INCREASED LEVEL OF POLYPLOIDY1-1D); translation repressor | chr5:2765982-2770283 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transcriptional repressor ILP1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ILP1 | GC-rich sequence DNA-binding factor-like protein | chr5:2765981-2770282 REVERSE LENGTH=908 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • GC-rich sequence DNA-binding factor OS=Arabidopsis thaliana GN=ILP1 PE=2 SV=1 [ARATH-contam.fasta]
  • GC-rich sequence DNA-binding factor-like protein ILP1 OS=Arabidopsis thaliana GN=ILP1 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 908 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: negative regulation of transcription [IDA]
    DNA endoreduplication [IMP]
    Molecular Function: translation repressor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSNRPKNFR RRGDDGGDEI DGKVATPSSK PTSTLSSSKP KTLSASAPKK KLLSFADDEE  60
   61 EEEDGAPRVT IKPKNGRDRV KSSSRLGVSG SSHRHSSTKE RRPASSNVLP QAGSYSKEAL 120
  121 LELQKNTRTL PYSRSSANAE PKVVLKGLIK PPQDHEQQSL KDVVKQVSDL DFDEEGEEEQ 180
  181 HEDAFADQAA IIRAKKERMR QSRSAPAPDY ISLDGGIVNH SAVEGVSDED ADFQGIFVGP 240
  241 RPQKDDKKGV FDFGDENPTA KETTTSSIYE DEDEEDKLWE EEQFKKGIGK RMDEGSHRTV 300
  301 TSNGIGVPLH SKQQTLPQQQ PQMYAYHAGT PMPNVSVAPT IGPATSVDTL PMSQQAELAK 360
  361 KALKDNVKKL KESHAKTLSS LTKTDENLTA SLMSITALES SLSAAGDKYV FMQKLRDFIS 420
  421 VICDFMQNKG SLIEEIEDQM KELNEKHALS ILERRIADNN DEMIELGAAV KAAMTVLNKH 480
  481 GSSSSVIAAA TGAALAASTS IRQQMNQPVK LDEFGRDENL QKRREVEQRA AARQKRRARF 540
  541 ENKRASAMEV DGPSLKIEGE SSTDESDTET SAYKETRDSL LQCADKVFSD ASEEYSQLSK 600
  601 VKARFERWKR DYSSTYRDAY MSLTVPSIFS PYVRLELLKW DPLHQDVDFF DMKWHGLLFD 660
  661 YGKPEDGDDF APDDTDANLV PELVEKVAIP ILHHQIVRCW DILSTRETRN AVAATSLVTN 720
  721 YVSASSEALA ELFAAIRARL VEAIAAISVP TWDPLVLKAV PNTPQVAAYR FGTSVRLMRN 780
  781 ICMWKDILAL PVLENLALSD LLFGKVLPHV RSIASNIHDA VTRTERIVAS LSGVWTGPSV 840
  841 TRTHSRPLQP LVDCTLTLRR ILEKRLGSGL DDAETTGLAR RLKRILVELH EHDHAREIVR 900
  901 TFNLKEAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..234] deduced N/A No confident structure predictions are available.
    2 View Details [235..352] PSI-BLAST 4.69897 No description for 2i1jA was found.
    3 View Details [353..668] PSI-BLAST 13.0 Heavy meromyosin subfragment
    4 View Details [669..908] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle