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Protein Overview: gi|30682530, gi|...

General Information:
Name(s) found: gi|3157934 [NCBI NR]
gi|30682530 [NCBI NR]
gi|25304567 [NCBI NR]
Description(s) found:
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  • gi|3157934|gb|AAC17617.1| Similar to hypothetical protein F09E5.8 gb|U37429 from C. elegans. ESTs gb|T42019 and gb|N97000 come from this gene. [Arabidopsis thaliana] [NCBI NR]
  • gi|30682530|ref|NP_849649.1| alanine racemase family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||B86254 hypothetical protein [imported] - Arabidopsis thaliana [NCBI NR]
  • (O65386) F12F1.20 protein [athaliana3702.FASTAC.txt]
  • Similar to hypothetical protein F09E5.8 gb|U37429 from C. elegans. ESTs gb|T42019 and gb|N97000 come from this gene. [Arabidopsis thaliana]gi|30682530|ref|NP_849649.1| alanine racemase family protein [Arabidopsis thaliana]gi|25304567|pir||B86254 hypoth [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Alanine racemase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | alanine racemase family protein | chr1:4028781-4030296 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • pyridoxal phosphate binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Similar to hypothetical protein F09E5.8 gb|U37429 from C. elegans. ESTs gb|T42019 and gb|N97000 come from this gene. [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Predicted pyridoxal phosphate-dependent enzyme, YBL036C type | chr1:4028783-4030298 FORWARD LENGTH=255 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • F12F1.20 protein OS=Arabidopsis thaliana GN=F12F1.20 PE=3 SV=1 [ARATH-contam.fasta]
  • Isoform of Q944L8, F12F1.20 protein OS=Arabidopsis thaliana GN=F12F1.20 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 255 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEEEPDKEH VADSTMSAAA IDGVAALRSV FQRVNQAAEK AGRGSDQIRV VAVSKTKPVS  60
   61 LIRQVYDAGQ RSFGENYVQE IIEKAPQLPE DIEWHFIGNL QSNKVKPLLS GVPNLVTVES 120
  121 VDDEKIANML DRVVGNIGRK PLKVFVQVNT SGEDSKFGVE PSGCVGLAKH VKEACSNLEF 180
  181 SGLMTIGMAD YTSTPENFKL LAKCRSEVCK ELGIPEEQCE LSMGMSGDFE LAIELGSTNV 240
  241 RIGSTIFGAR EYPKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..255] PSI-BLAST 49.69897 No description for 1w8gA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle